Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00818 ATGGCTGGTCGGTTCGGGGTTTCTTCCTCATCTGGGTCGTCCATGTCGATGATCGTCACGAATACACCGTCCCAGGACCTCGCTCTTACCAATCTTGCTTTCTGCTCTGCTGCCGATCTTCATGGTTTCAGTGTACCTGGTTTCAACAACCTCTACCTCGCTTCAGTTGGCGACTTCTTGGTTATGACAGCAGGCCAGAAAGTACTGTTTGAGTATCATGGCAACAACTATTCTTTTACAGTCACTCAAGCAGCTCTTGAGGATGAAGAGAAGTCTGGTACTATTGAGAGAGGGATGATTACAGACGATACATATATTGTCTTTGAAGCATCACATGACAGTGGGATACAGATTGTTAATGGTCCTGAAGTATTGAGCAAATTTGTTGGTGAAACTGAAAAGAATGTTAGAGACCTTTTCGCAGATGCTGAACAAGATCAGAAGACTCGTGGAGACCAAAGCGATCTGCATGTCATAATTTTTGATGAAATTGATGCTATCTGCAAGGCGAGTATCGTTTACTTCATCGAAAATGCCTAA 540 0.437 MAGRFGVSSSSGSSMSMIVTNTPSQDLALTNLAFCSAADLHGFSVPGFNNLYLASVGDFLVMTAGQKVLFEYHGNNYSFTVTQAALEDEEKSGTIERGMITDDTYIVFEASHDSGIQIVNGPEVLSKFVGETEKNVRDLFADAEQDQKTRGDQSDLHVIIFDEIDAICKASIVYFIENA* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00818 179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 170 IPR027417 -
Pte2g00818 179 Gene3D - 107 172 IPR027417 -
Pte2g00818 179 Pfam ATPase family associated with various cellular activities (AAA) 116 171 IPR003959 GO:0005524|GO:0016887
Pte2g00818 179 SUPERFAMILY Cdc48 domain 2-like 61 121 IPR029067 -
Pte2g00818 179 PANTHER VESICULAR-FUSION PROTEIN NSF 61 117 IPR039812 GO:0016887|GO:0035494
Pte2g00818 179 Gene3D - 12 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00818 Pte-Chr2 7304778 7315691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00818 119 167 Calmodulin-binding Proteins AT3G56690 46.939 5.33e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00818 K06027 - csin:114267103 168.703