Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00800 ATGCATACAGCTTCCGTGCGTAGGTCTTTCAAGGATTCCTTGAAAGTGCTCGAAGCTGATATTCAGCATGCCAATACTCTGGCGTCAGATTTTCCAAGGGAGTATGATGGTACTTGCCTTCAAATGAGGATGTCCTACAGTCCTGCTGCACATTTCTTACTTTTTCTTGTGCAATGGACAGACTGCCATCTTGCTGGAGCCCTTGGGTTGCTAAGGATATTAATTTACAGGGTTCATGTGGATGGCACGACCACAATGACTACCCATGAAAGGAAAGCAAGTATCAGAGAATTCTATGCGATAATATATCCCTCTTTAGTTCAACTTCAAAGAGGTGTGACCGATTCTGAAGATAAAAAGCAAAAGACCATATGTATGGAGAGGTATCGAAGAAGAGATGATGATGAATATAGGCTATCTTCAGATGTCGACATTGAAAGAGAAGAAGAATGTGGAATATGCATGGAAATGAATAGCAAGATTGTATTGCCCAATTGCAACCATGCTATGTGCTTCAAATGTTACCGTGAATGGCGAACAAGGTCACAGTCATGCCCATTTTGCCGTGATAGTCTTAAAAGAGTAAATTCTGGTGATCTCTGGGTATTCACCGACAGCAAAGACATAGTAGACATGGCCACAGTGACGAGGGAGAACCTGAGAAGGCTCTTCCTGTACATAGACAAGTTGCCAGTAGTTGTCCCAGATTCACTTTTTGAGACATACGATTCCCACGTTAGATAG 744 0.4247 MHTASVRRSFKDSLKVLEADIQHANTLASDFPREYDGTCLQMRMSYSPAAHFLLFLVQWTDCHLAGALGLLRILIYRVHVDGTTTMTTHERKASIREFYAIIYPSLVQLQRGVTDSEDKKQKTICMERYRRRDDDEYRLSSDVDIEREEECGICMEMNSKIVLPNCNHAMCFKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDSKDIVDMATVTRENLRRLFLYIDKLPVVVPDSLFETYDSHVR* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00800 247 FunFam RING/U-box superfamily protein 129 198 - -
Pte2g00800 247 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Pte2g00800 247 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Pte2g00800 247 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Pte2g00800 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 198 IPR013083 -
Pte2g00800 247 PANTHER RING FINGER PROTEIN 41, 151 8 244 - -
Pte2g00800 247 SUPERFAMILY RING/U-box 139 194 - -
Pte2g00800 247 SMART ring_2 151 188 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00800 Pte-Chr2 7035779 7039111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00800 137 229 C3H Transcription Factor Family AT2G20030 30.000 2.62e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00800 K25840 - qsa:O6P43_012630 447.588