Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00797 ATGAGTTGTAGCTGCTTTAGGGCATCAGAAGTGAAAATAAAGAGGAAGTCTGCCCAGCCCTCTCATGGCCTTGATGGCCTTCAACTTGATAACCTTAAACAGTTCTCCATTAATGAATTAAAATCTGCTACAGATAACTTCCATTTAAGCAAAAAGATTGGAAGAGGAGGATTTGGGATAGTTTACAAGGCGACCTTAAAAGATGGGAGTCAGGTTGCAGTGAAGAGACTTTCTACTGGGTCAAAGCAGGGTGCTCGTGAATTTCTATCTGAAATCAATACTATATCAAATGTTAAGCATCCCAATCTCGTTGAATTGATTGGCTGCTTTGCTGAAGGATCTGACAGGGTGTTAGTGTATGAGTATGTTGAAAATAGCAGTCTTGATCGTGCATTACTAGGGTCAAAGAATAACAAAATTAAACTAGGCTGGAGAGAAAGATCCATAATTTGCTTGGGCACAGCTAAGGGTCTTGCATTCCTTCACGAGGAACTTGTGCCACGTATTGTGCACCGAGACATCAAAGCTAGTAATATACTTCTTGACAAAAACTTTATCCCCAAAATTGGTGACTTTGGGTTGGCTAAGCTCTTCCCAGAGGATATAACACATATCAGCACAAGAATTGCCGGCACAACTGGTTATTTAGCACCAGAGTATGCCCTGGGTGGTCAACTGACGATGAAAGCAGATGTATACAGTTTTGGAGTTCTTGTGCTTGAAATAATCAGTGGCAGATGCAGTGCAAGGTCAAACTGGGGAGGAGTGTCAAAATTACTTCTTGAGTGGGCTTGGCAGCTTCATGAGGAAGAGAAACTATTGGAACTAGTGGATCCAGAGATGGGAGAGTTTCCAGAGGAAGAAGTGGTTAGGTACATTAAGGTAGCTTTTTTTTGTACGCAAGCAGCTGCTAGCCGGAGACCGCTGATGTCTCAGGTGGTTAATATGCTCTCCAGGAATATCCGACTCAATGAGAAGGAAATAACTGCTCCTGGATATTTTCAAGATTCAGGAATCAGTGGAGAACCATCTTCGAAGAAGACATCCTTAGACTCTACGAGCTACAAGCTTAGCTCCGTCCCTATATCAATTACTAATGTGGCTCCACGATGA 1113 0.425 MSCSCFRASEVKIKRKSAQPSHGLDGLQLDNLKQFSINELKSATDNFHLSKKIGRGGFGIVYKATLKDGSQVAVKRLSTGSKQGAREFLSEINTISNVKHPNLVELIGCFAEGSDRVLVYEYVENSSLDRALLGSKNNKIKLGWRERSIICLGTAKGLAFLHEELVPRIVHRDIKASNILLDKNFIPKIGDFGLAKLFPEDITHISTRIAGTTGYLAPEYALGGQLTMKADVYSFGVLVLEIISGRCSARSNWGGVSKLLLEWAWQLHEEEKLLELVDPEMGEFPEEEVVRYIKVAFFCTQAAASRRPLMSQVVNMLSRNIRLNEKEITAPGYFQDSGISGEPSSKKTSLDSTSYKLSSVPISITNVAPR* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00797 370 CDD STKc_IRAK 53 319 - -
Pte2g00797 370 SMART serkin_6 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00797 370 SUPERFAMILY Protein kinase-like (PK-like) 31 326 IPR011009 -
Pte2g00797 370 MobiDBLite consensus disorder prediction 338 354 - -
Pte2g00797 370 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 344 - -
Pte2g00797 370 MobiDBLite consensus disorder prediction 334 354 - -
Pte2g00797 370 FunFam receptor-like serine/threonine-protein kinase NCRK 25 122 - -
Pte2g00797 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Pte2g00797 370 Gene3D Transferase(Phosphotransferase) domain 1 123 332 - -
Pte2g00797 370 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00797 370 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 329 - -
Pte2g00797 370 Gene3D Phosphorylase Kinase; domain 1 17 122 - -
Pte2g00797 370 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Pte2g00797 370 Pfam Protein kinase domain 47 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00797 Pte-Chr2 6990723 6995665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00797 35 359 Receptor kinase-like Gene Family AT1G56120 52.308 1.46e-109 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte2g00797 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00797 - - gmx:100775344 548.895