Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00790 CCGGAGGCAGAGGAGCTGCCTAAGGCTATCGTGCGCCTTGTAGCAAAGGATGCACTGTCGCGGTGCTCAGACGTTGGGGACATGTCTATTCACAGCAATGCCCTCACCGCTTTTGCTGAAAGCGCCCGAATATTACGTCTCTGCCATGTAAGGATTCGAAGCAATTTCGTTCAATTTATTTTCCGAATGATTAGATTTGAGGCCAACGATATATGTAAGGAGTCGAAGAGACAGACGATAAACGCTGATGATGTGTTCAACGCACTTGAAGAGATTGAGTTCACTGAATTTGTCCGCCCTCTGAAAGCTTCTCTTGAA 318 0.4717 PEAEELPKAIVRLVAKDALSRCSDVGDMSIHSNALTAFAESARILRLCHVRIRSNFVQFIFRMIRFEANDICKESKRQTINADDVFNALEEIEFTEFVRPLKASLE 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00790 106 Gene3D Histone, subunit A 1 106 IPR009072 GO:0046982
Pte2g00790 106 SUPERFAMILY Histone-fold 6 105 IPR009072 GO:0046982
Pte2g00790 106 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 4 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00790 Pte-Chr2 6845973 6848970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00790 30 106 CCAAT-HAP3 Transcription Factor Family AT5G47640 33.766 6.03e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00790 K02326 - qsa:O6P43_000470 118.627