Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00787 ATGAAACAAGTTATGGATAAGGATAACGGCACGGACTCAACCACCACTCCATCTCAACACCCGCAACTTCCTCCTGGCTTTCGTTTCCATCCCACAGATGAAGAACTCGTTGTGCATTACCTCAAGAGAAAAACTGACTCGGCACCTCTTCCTGTTACTATCATAGCAGAGGTTGATCTCTACAAGTTCGACCCTTGGGAGCTACCAAGTAAAGCAACGTTTGGTGAACAAGAATGGTATTTCTTCAGTCCTAGAGATCGAAAATACCCAAACGGGGCGAGACCCAATCGAGCTGCTACTTCTGGGTATTGGAAAGCAACTGGAACTGATAAGCCTATACTATCATCAGATGGAAACCAGAAAGTTGGTGTGAAAAAAGCTCTCGTCTTCTATGGTGGAAAGCCTCCAAAAGGTGTGAAGACAAATTGGATTATGCATGAGTATAGACTTACTGACAAATCAATCTCAAAGCCTCCTGTTGCTGCTGCTGCTGATCATGCTCAAACTAATAATAACAAGAAAAATTCCTTAAGGCTTGACGATTGGGTTTTGTGTCGGATATATAAGAAACCCAACAATATGCAAAGGGCGATGATGATGGAGCAATACAAAGATGATTCCATGGCTGCTTTGATACCATCCATGCCAACGCTGACGATGATGAACACCCACCAGAACATAAAACCTACTGGCAGAGGAACCAATTATGGTGCACTGGGGGGGATTGACAATGATGACAACTTCTTGGAAGGGATTTTGGCAGCAGAGCTAACCATACAGCAACATGGTTCTGAATCTCATTGTGAGTTAGGGTCGTGTATGGCCAAAAACACCTTCTCATTGAAACGACAACTGCCATCGCAGTTTTGGAATGAAACTGCAGCTGGTTCAATGGGAACATCTTCAGCAGGCAAGAGATTTCATGGTGATCTCAACAGTGGCAGCAGTAATGGCAATCATGAAGACAACAACTCTTTCATATCTCTGCTCAGTCAAATTCCCCAGAACACATCATTTCACAACAACGGCCTTCTTGGCTCTGTCAGTGATGGTGCTTTACGTCAACAATTCCAACTTTCCAGTGTGAACTGGAACTCTTAG 1101 0.4396 MKQVMDKDNGTDSTTTPSQHPQLPPGFRFHPTDEELVVHYLKRKTDSAPLPVTIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDKSISKPPVAAAADHAQTNNNKKNSLRLDDWVLCRIYKKPNNMQRAMMMEQYKDDSMAALIPSMPTLTMMNTHQNIKPTGRGTNYGALGGIDNDDNFLEGILAAELTIQQHGSESHCELGSCMAKNTFSLKRQLPSQFWNETAAGSMGTSSAGKRFHGDLNSGSSNGNHEDNNSFISLLSQIPQNTSFHNNGLLGSVSDGALRQQFQLSSVNWNS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00787 366 FunFam NAC transcription factor 56 32 195 - -
Pte2g00787 366 Pfam No apical meristem (NAM) protein 24 150 IPR003441 GO:0003677|GO:0006355
Pte2g00787 366 PANTHER NAC TRANSCRIPTION FACTOR 56 23 224 - -
Pte2g00787 366 MobiDBLite consensus disorder prediction 300 319 - -
Pte2g00787 366 MobiDBLite consensus disorder prediction 1 29 - -
Pte2g00787 366 SUPERFAMILY NAC domain 15 190 IPR036093 GO:0003677|GO:0006355
Pte2g00787 366 MobiDBLite consensus disorder prediction 8 22 - -
Pte2g00787 366 Gene3D NAC domain 32 195 IPR036093 GO:0003677|GO:0006355
Pte2g00787 366 ProSiteProfiles NAC domain profile. 23 190 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00787 Pte-Chr2 6687135 6688940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00787 8 367 NAC Transcription Factor Family AT1G61110 50.949 6.61e-113 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte2g00787 NAM 7.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00787 - - qsa:O6P43_031801 512.686