LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g00773	ATGAAGTGCGATGCTAGTTCTAGTCTGAATCTTGGTGGAGGACTTTTGACATATGCCGAAGCCGGTCCAAATCAGAGTATACAAGGAGTTGTTCCATCTGAAACGGAGGCCAAGAAAAAGAAAGTGGTTGTTCTTGGTACAGGATGGGCAGGAACCAGTTTTTTAAGGAATCTCAAGAATCCTACTTATGACGTTCAGGTGATTTCACCTCGTAACTATTTTGCATTCACTCCTTTGCTTCCCAGTGTTACTGTAGGTACCGTGGAGCCTCGCAGCATAGTAGAACCAATTCGCAACATTGTGAGGAAGAAAAAGGTAGATATTCAATTCAATGAAGCAGAGTGTATTAGGATTGATGCAGAGAATAAGAAGATCCATTGCAGATCTAATACAAATAACAATTTGAATGGGAAGGAAGAGTTTGTGCTCGACTACGATTACCTTATTATAGCTGTGGGAGCTACTGTTAACACATTCAATACCCCTGGAGTGGTTGAAAATTGCCATTTCTTGAAGGAAGTGGAAGATGCTCAGAGGATTCGTAGAACTGTTATTGACTGTTTTGAGAGGGCAAGTCTAGCAAATGTAAGTGATGAAGAGAAGAAGAGGATTCTTCATTTTGCTGTGGTAGGTGGTGGGCCAACTGGTGTCGAGTTTGCTGCTGAGCTTCATGATTTTGTGAATGAGGATTTGGTCAAGTTATATCCTGGAATCAAAGAGATGGTTAAAATCACACTTCTGGAAGCAACTGATCATATCTTGAATATGTTTGATAAAAGAATAACTGCCTTTGCTGAAGAGAAGTTTGGGAGAGAAGGCATTGACGTCAAAACAGGATATATGGTGACAAAAGTGACTGACAAGGAAATTTCCACTAAGCAAATGAAAAATGGGGATGTTTCCACCATGCCCTATGGAATGGTTGTCTGGTCAACTGGGATTGCTACACGTCCTTTCGTCAAAGATTTTATGAAGCAAGTTGGCCAGGCAAATAGGCGTGCCTTAGCTACTGACGAGTGGCTGAGAGTTGAGGGCTGCGACAGTGTATATGCTCTTGGTGATTGTGCTACAATAAACCAACGCAAAGTCATGGAAGATATTGCCGCTATATTTAGCAAGGCTGACAAGGACAAATCAGGAACACTGACTGTAAAGGAGCTTCAGGAAGTGATTAATGATATATGTGAAAGATACCCACAGGTTGAGCTCTATTTGAAGAGTAAACAGATGAAAAACATTGTTGACTTATTGAAGGAAGCAAAGGCAGATGTTGACAAGGAATCTGTTGAACTTAACATAGAAGAACTTAAGAAAGCGCTTTCTCAAGTGGACTCTCAAGCGAAATTTCTTCCAGCTACTGCACAGGTTGCAGCTCAGCAAGGCGCCTATCTTGCCAAATGTTTCAACCGTATGGAGGAGTGCGAGAAGAATCCTGAGGGTCCTATCAGATTCAGAGGAGAAGGGCGACACCGATTCCGTCCATTCAGGTACAAGCATTTAGGACAATTTGCTCCTCTTGGTGGAGAGCAGACTGCAGCTCAACTTCCTGGAGATTGGGTTTCAATCGGCCACAGTAGCCAATGGTTATGGTACTCTGTTTACGCTAGCAAGCAATTCAGTTGGCGTACAAGGGCACTGGTGGTATCAGACTGGTGCAAGCGTTTTATTTTTGGAAGGGATTCAAGTCGAATTTGA	1695	0.426	MKCDASSSLNLGGGLLTYAEAGPNQSIQGVVPSETEAKKKKVVVLGTGWAGTSFLRNLKNPTYDVQVISPRNYFAFTPLLPSVTVGTVEPRSIVEPIRNIVRKKKVDIQFNEAECIRIDAENKKIHCRSNTNNNLNGKEEFVLDYDYLIIAVGATVNTFNTPGVVENCHFLKEVEDAQRIRRTVIDCFERASLANVSDEEKKRILHFAVVGGGPTGVEFAAELHDFVNEDLVKLYPGIKEMVKITLLEATDHILNMFDKRITAFAEEKFGREGIDVKTGYMVTKVTDKEISTKQMKNGDVSTMPYGMVVWSTGIATRPFVKDFMKQVGQANRRALATDEWLRVEGCDSVYALGDCATINQRKVMEDIAAIFSKADKDKSGTLTVKELQEVINDICERYPQVELYLKSKQMKNIVDLLKEAKADVDKESVELNIEELKKALSQVDSQAKFLPATAQVAAQQGAYLAKCFNRMEECEKNPEGPIRFRGEGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQFSWRTRALVVSDWCKRFIFGRDSSRI*	565

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte2g00773	564	Pfam	Pyridine nucleotide-disulphide oxidoreductase	40	365	IPR023753	GO:0016491
	Pte2g00773	564	SUPERFAMILY	FAD/NAD(P)-binding domain	201	359	IPR036188	-
	Pte2g00773	564	PRINTS	FAD-dependent pyridine nucleotide reductase signature	145	163	-	-
	Pte2g00773	564	PRINTS	FAD-dependent pyridine nucleotide reductase signature	42	61	-	-
	Pte2g00773	564	PRINTS	FAD-dependent pyridine nucleotide reductase signature	206	224	-	-
	Pte2g00773	564	FunFam	External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial	31	391	-	-
	Pte2g00773	564	FunFam	External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial	408	563	-	-
	Pte2g00773	564	ProSitePatterns	EF-hand calcium-binding domain.	375	387	IPR018247	-
	Pte2g00773	564	Coils	Coil	417	446	-	-
	Pte2g00773	564	SUPERFAMILY	FAD/NAD(P)-binding domain	39	258	IPR036188	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g00773	Pte-Chr2	6568134	6572811	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte2g00773	12	565	Chloroplast and Mitochondria Gene Families	AT4G21490	76.216	0.0	861

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g00773	K03885		-	qsa:O6P43_012561	980.319

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