Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00773 ATGAAGTGCGATGCTAGTTCTAGTCTGAATCTTGGTGGAGGACTTTTGACATATGCCGAAGCCGGTCCAAATCAGAGTATACAAGGAGTTGTTCCATCTGAAACGGAGGCCAAGAAAAAGAAAGTGGTTGTTCTTGGTACAGGATGGGCAGGAACCAGTTTTTTAAGGAATCTCAAGAATCCTACTTATGACGTTCAGGTGATTTCACCTCGTAACTATTTTGCATTCACTCCTTTGCTTCCCAGTGTTACTGTAGGTACCGTGGAGCCTCGCAGCATAGTAGAACCAATTCGCAACATTGTGAGGAAGAAAAAGGTAGATATTCAATTCAATGAAGCAGAGTGTATTAGGATTGATGCAGAGAATAAGAAGATCCATTGCAGATCTAATACAAATAACAATTTGAATGGGAAGGAAGAGTTTGTGCTCGACTACGATTACCTTATTATAGCTGTGGGAGCTACTGTTAACACATTCAATACCCCTGGAGTGGTTGAAAATTGCCATTTCTTGAAGGAAGTGGAAGATGCTCAGAGGATTCGTAGAACTGTTATTGACTGTTTTGAGAGGGCAAGTCTAGCAAATGTAAGTGATGAAGAGAAGAAGAGGATTCTTCATTTTGCTGTGGTAGGTGGTGGGCCAACTGGTGTCGAGTTTGCTGCTGAGCTTCATGATTTTGTGAATGAGGATTTGGTCAAGTTATATCCTGGAATCAAAGAGATGGTTAAAATCACACTTCTGGAAGCAACTGATCATATCTTGAATATGTTTGATAAAAGAATAACTGCCTTTGCTGAAGAGAAGTTTGGGAGAGAAGGCATTGACGTCAAAACAGGATATATGGTGACAAAAGTGACTGACAAGGAAATTTCCACTAAGCAAATGAAAAATGGGGATGTTTCCACCATGCCCTATGGAATGGTTGTCTGGTCAACTGGGATTGCTACACGTCCTTTCGTCAAAGATTTTATGAAGCAAGTTGGCCAGGCAAATAGGCGTGCCTTAGCTACTGACGAGTGGCTGAGAGTTGAGGGCTGCGACAGTGTATATGCTCTTGGTGATTGTGCTACAATAAACCAACGCAAAGTCATGGAAGATATTGCCGCTATATTTAGCAAGGCTGACAAGGACAAATCAGGAACACTGACTGTAAAGGAGCTTCAGGAAGTGATTAATGATATATGTGAAAGATACCCACAGGTTGAGCTCTATTTGAAGAGTAAACAGATGAAAAACATTGTTGACTTATTGAAGGAAGCAAAGGCAGATGTTGACAAGGAATCTGTTGAACTTAACATAGAAGAACTTAAGAAAGCGCTTTCTCAAGTGGACTCTCAAGCGAAATTTCTTCCAGCTACTGCACAGGTTGCAGCTCAGCAAGGCGCCTATCTTGCCAAATGTTTCAACCGTATGGAGGAGTGCGAGAAGAATCCTGAGGGTCCTATCAGATTCAGAGGAGAAGGGCGACACCGATTCCGTCCATTCAGGTACAAGCATTTAGGACAATTTGCTCCTCTTGGTGGAGAGCAGACTGCAGCTCAACTTCCTGGAGATTGGGTTTCAATCGGCCACAGTAGCCAATGGTTATGGTACTCTGTTTACGCTAGCAAGCAATTCAGTTGGCGTACAAGGGCACTGGTGGTATCAGACTGGTGCAAGCGTTTTATTTTTGGAAGGGATTCAAGTCGAATTTGA 1695 0.426 MKCDASSSLNLGGGLLTYAEAGPNQSIQGVVPSETEAKKKKVVVLGTGWAGTSFLRNLKNPTYDVQVISPRNYFAFTPLLPSVTVGTVEPRSIVEPIRNIVRKKKVDIQFNEAECIRIDAENKKIHCRSNTNNNLNGKEEFVLDYDYLIIAVGATVNTFNTPGVVENCHFLKEVEDAQRIRRTVIDCFERASLANVSDEEKKRILHFAVVGGGPTGVEFAAELHDFVNEDLVKLYPGIKEMVKITLLEATDHILNMFDKRITAFAEEKFGREGIDVKTGYMVTKVTDKEISTKQMKNGDVSTMPYGMVVWSTGIATRPFVKDFMKQVGQANRRALATDEWLRVEGCDSVYALGDCATINQRKVMEDIAAIFSKADKDKSGTLTVKELQEVINDICERYPQVELYLKSKQMKNIVDLLKEAKADVDKESVELNIEELKKALSQVDSQAKFLPATAQVAAQQGAYLAKCFNRMEECEKNPEGPIRFRGEGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQFSWRTRALVVSDWCKRFIFGRDSSRI* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00773 564 Pfam Pyridine nucleotide-disulphide oxidoreductase 40 365 IPR023753 GO:0016491
Pte2g00773 564 SUPERFAMILY FAD/NAD(P)-binding domain 201 359 IPR036188 -
Pte2g00773 564 PRINTS FAD-dependent pyridine nucleotide reductase signature 145 163 - -
Pte2g00773 564 PRINTS FAD-dependent pyridine nucleotide reductase signature 42 61 - -
Pte2g00773 564 PRINTS FAD-dependent pyridine nucleotide reductase signature 206 224 - -
Pte2g00773 564 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 31 391 - -
Pte2g00773 564 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 408 563 - -
Pte2g00773 564 ProSitePatterns EF-hand calcium-binding domain. 375 387 IPR018247 -
Pte2g00773 564 Coils Coil 417 446 - -
Pte2g00773 564 SUPERFAMILY FAD/NAD(P)-binding domain 39 258 IPR036188 -
Pte2g00773 564 ProSiteProfiles EF-hand calcium-binding domain profile. 362 397 IPR002048 GO:0005509
Pte2g00773 564 SMART efh_1 366 394 IPR002048 GO:0005509
Pte2g00773 564 PANTHER NADH DEHYDROGENASE 33 564 IPR045024 GO:0003954|GO:0006116
Pte2g00773 564 Gene3D - 31 409 - -
Pte2g00773 564 Gene3D - 410 563 - -
Pte2g00773 564 SUPERFAMILY EF-hand 320 450 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00773 Pte-Chr2 6568134 6572811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00773 12 565 Chloroplast and Mitochondria Gene Families AT4G21490 76.216 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00773 K03885 - qsa:O6P43_012561 980.319