Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00772 ATGGAAGATGAAGTAGGTTCCAGACACGCACAAGCAGAGCAACAAGCCTCCACCAGAAACTATGGTCTTCGGTTCGCCGTTGATTCAATATCTTCTTTGATTTCATTTTCGCACTCAATTAGAGTCTTCCCAGCAAAATGGCAGATGATAAGGAATAAGCTCGAAGAGCTTCATTCTGGGTTCGTCGATATGGAGAACTGTGTTTCAGGAGAGAACATATCACTCTCTGGTTTAGTGCCTGCCATTTTGGTTACTGTTGACGAGTGTTATGATCTTGCTCGCCGTTGTATTGATGTTTCGTACAGTGGGAAGCTTTTGATGCAGAGTGATTTGGATATGATCTTCGCCAAATTTGTTCGCCATGCGAGAAAGCTCTCAGAGTTGTACACAGCTGGTATTTTGACTCATAAGTATGCACTTATTGTTTCTAGGCCTATTCTCGGTGCTAGTAAAGATGATATGAGGTTTTACATTAGGGATTTGCTGACGAGGATGAAAATTGGTGATTTAGATATGAAAAGACAAGCTTTGGTCAATCTTCATGAAGTTGTGGCTGAAGATGAAAAGTATGTGAGGGTTATGGTTGAAGTGAGTGACATTGTCAACGTATTGGTCAATTTTCTTGATTCCCCAGAAATGGAAATCCAAGCAAGTTCAACAAAAGTGGTATCTTTGATTGCAGGTTTTGATTGTTACAAAGGAATGTTGATTGCAGCTGGGGCTATTGCACCTTTAATTCGAGTCTTGGAATGTGGGAGTGGATTTGGAAAGGAAGGAGCTGCGATGTGTTTGAGGAAATTGACTGAGAATGCAGACAATGCTTGGTCAGTTTCAGCTCATGGTGGCATCACATCTTTGTTGAATATATGTGCCAATGATGATTGTAAAAGTGAATTGGTAGGTCCTGCTTGTGGGATTTTGAGAAATCTTGTATGTGTTGAAGAAATCAAGACATTCATGGTTGATGAAGGTGCAATTTCTACTTTCATTAAGCTTTTGAGATCGAAGGAGGAAACAATTCAGGTTCATTCGATGGAGTTAATTCAACAGATTGCTTCAGAAGATGAATCTGTTAAGCAAATGGTTATAAGAGAAGGCGGGGTTCGAGCACTGCTTCGAATATTGGACCCAAGATGGTCATATTCTTCAAAAGCAAGAGAAATAGCAATAAGGGTCATTGAGAATCTGTGTTTTTCGTCCAATACTTCTATTACTATTTTGATGAACTCTGGATTTGTGGATCAGCTTCTATATTATATTCGACATGGTGAGGTCTCCTTTCAGGAATTGGCATTGAAAGTTGCTGTCAGGTTGTGTGGGATATCAGAGGGAGCAAAGAAAGCAATGGGAGAAGCAGGTATTATGGAAGAGCTTATCAAATTTTTGAATGCCAAGTCATTTGAAGTTCGTGAAATGGCTGCTGAGGCACTATTTGTTATGATCTTAGTACACAAAAATAGGAAGAAATTCCTGCAGGATGACAGAAATATTAGCATGCTTCTGCAATTGCTTGATTCGAACGAAGGGACTTCAGGTAACAAGAAATTCCTCATCTCTATATTAATGTCATTAACTAACTGCAATAGTGGAAGAAAAAAGATGGTAAATTCTGGGTGCCTAAAACACTTAGAAAAACTTGCAGAAGCTGAGGTTTCTGATGCCAAGAGACTTGTCAGGAAGTTATCTACTAACAGATTCCGTCATATGTTAACTGGAATCTGGAATTCGTGA 1731 0.3951 MEDEVGSRHAQAEQQASTRNYGLRFAVDSISSLISFSHSIRVFPAKWQMIRNKLEELHSGFVDMENCVSGENISLSGLVPAILVTVDECYDLARRCIDVSYSGKLLMQSDLDMIFAKFVRHARKLSELYTAGILTHKYALIVSRPILGASKDDMRFYIRDLLTRMKIGDLDMKRQALVNLHEVVAEDEKYVRVMVEVSDIVNVLVNFLDSPEMEIQASSTKVVSLIAGFDCYKGMLIAAGAIAPLIRVLECGSGFGKEGAAMCLRKLTENADNAWSVSAHGGITSLLNICANDDCKSELVGPACGILRNLVCVEEIKTFMVDEGAISTFIKLLRSKEETIQVHSMELIQQIASEDESVKQMVIREGGVRALLRILDPRWSYSSKAREIAIRVIENLCFSSNTSITILMNSGFVDQLLYYIRHGEVSFQELALKVAVRLCGISEGAKKAMGEAGIMEELIKFLNAKSFEVREMAAEALFVMILVHKNRKKFLQDDRNISMLLQLLDSNEGTSGNKKFLISILMSLTNCNSGRKKMVNSGCLKHLEKLAEAEVSDAKRLVRKLSTNRFRHMLTGIWNS* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00772 576 SMART arm_5 355 398 IPR000225 GO:0005515
Pte2g00772 576 SMART arm_5 229 269 IPR000225 GO:0005515
Pte2g00772 576 SMART arm_5 187 228 IPR000225 GO:0005515
Pte2g00772 576 SMART arm_5 313 353 IPR000225 GO:0005515
Pte2g00772 576 SMART arm_5 442 482 IPR000225 GO:0005515
Pte2g00772 576 SMART arm_5 270 312 IPR000225 GO:0005515
Pte2g00772 576 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 281 325 IPR000225 GO:0005515
Pte2g00772 576 Gene3D - 157 566 IPR011989 -
Pte2g00772 576 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 15 575 - -
Pte2g00772 576 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 324 367 IPR000225 GO:0005515
Pte2g00772 576 SUPERFAMILY ARM repeat 159 550 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00772 Pte-Chr2 6560329 6563041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00772 406 543 U-box Gene Family AT2G23140 29.710 2.10e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00772 - - qsa:O6P43_012559 829.706