Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte2g00761 | ATGGAGACTCTGTTACCGGACAATTTCAAGTGTCCAATTTCTCTCGAAATAATGTCTGACCCGGTTATCCTCTCAACGGGTCATACCTTTGACCGGGCTTCCATTCAGCAATGGCTAGACACCGGTAACAGGACATGTCCAATAACCAAACTGCCACTCCCTGATCAGCCTTCCCTCATTCCAAACCATGCTCTAAGAAGCTTGATTTCCAATTATGCCCTAGTCTCCCCGGAGCGGCCAATACTTCAGCCAGAGCCGGAGGCCCTCATCACCACACTCAACTCTCGATCGTGCACTGTCGACTCAAAAATCGAATGTTTGGACCAGCTCACTCGGTTGTCAAAGCGTAACTCGGTGTTCCGCAGGAGGTTGACTGAAGCAGGCGCTGTCTCGGCAGTGCTTCGCTGTGTTGACTCGGATGATATCGCTCTTCAAGAGAAAGCTCTGTTCTTGCTCTTAAACCTTAGTCTGGACGATGATAACAAAGTGGGTTTGGTTGCAGAAGGCGCAGTACGTCGAGTTGTGCCTGTGCTGCTTAGCGGGTCGCAGGACTCCCGAGCTGTAGCCGCGACTTTATTGACGAGTTTGGCTGTTGTGGAAGTGAATAAAGCCACAATTGGGGCTTACCCCCATGCGATTTCTGCGTTGGTTTCACTTCTAAAGGATGGAAAAGCCAGAGAGCAGAAAGAAGCTGCAACAGCCCTCTTCGCCATTTCTTCATTTCCCGATAATCGACGGAGAGCTGTCGAATGTGGAGCAGTACCAGTTTTGATTAGAATTGCTGATTCTGGGCTTGAAAGGGCAGTGGAAGTTCTGGGTACTTTGGCAAAATGCAAGGAAGGTAGGGAAGAGATGGACAAGTATTGTGGGACGCTACCAATTTTAGTAAGAATACTAAGGAATGGTAGCTCAAGAGGAGTACAGTATGCGTTATTGACATTGAACTCTCTCTGTTGCAATAGCAAAGGAATGTGTATAGAGACTGTCAAAGAAGGGGTTCTGGATATCTGTATGGGATTACTGGAAGACGATAATGAAAAAGTTAGGAGGAATGCTTCCAGTTTGATTAAAGTTCTACGTGGAAATTATAGTATGAGATGA | 1101 | 0.4714 | METLLPDNFKCPISLEIMSDPVILSTGHTFDRASIQQWLDTGNRTCPITKLPLPDQPSLIPNHALRSLISNYALVSPERPILQPEPEALITTLNSRSCTVDSKIECLDQLTRLSKRNSVFRRRLTEAGAVSAVLRCVDSDDIALQEKALFLLLNLSLDDDNKVGLVAEGAVRRVVPVLLSGSQDSRAVAATLLTSLAVVEVNKATIGAYPHAISALVSLLKDGKAREQKEAATALFAISSFPDNRRRAVECGAVPVLIRIADSGLERAVEVLGTLAKCKEGREEMDKYCGTLPILVRILRNGSSRGVQYALLTLNSLCCNSKGMCIETVKEGVLDICMGLLEDDNEKVRRNASSLIKVLRGNYSMR* | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte2g00761 | 366 | SMART | Ubox_2 | 8 | 72 | IPR003613 | GO:0004842|GO:0016567 | |
Pte2g00761 | 366 | CDD | RING-Ubox_PUB | 6 | 56 | IPR045210 | - | |
Pte2g00761 | 366 | FunFam | RING-type E3 ubiquitin transferase | 4 | 75 | - | - | |
Pte2g00761 | 366 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 5 | 71 | IPR013083 | - | |
Pte2g00761 | 366 | SUPERFAMILY | RING/U-box | 5 | 73 | - | - | |
Pte2g00761 | 366 | SUPERFAMILY | ARM repeat | 88 | 359 | IPR016024 | - | |
Pte2g00761 | 366 | ProSiteProfiles | U-box domain profile. | 4 | 79 | IPR003613 | GO:0004842|GO:0016567 | |
Pte2g00761 | 366 | Gene3D | - | 266 | 362 | IPR011989 | - | |
Pte2g00761 | 366 | Gene3D | - | 72 | 265 | IPR011989 | - | |
Pte2g00761 | 366 | PANTHER | U BOX DOMAIN-CONTAINING | 6 | 358 | - | - | |
Pte2g00761 | 366 | SMART | arm_5 | 202 | 240 | IPR000225 | GO:0005515 | |
Pte2g00761 | 366 | SMART | arm_5 | 117 | 157 | IPR000225 | GO:0005515 | |
Pte2g00761 | 366 | SMART | arm_5 | 278 | 319 | IPR000225 | GO:0005515 | |
Pte2g00761 | 366 | SMART | arm_5 | 158 | 198 | IPR000225 | GO:0005515 | |
Pte2g00761 | 366 | SMART | arm_5 | 241 | 277 | IPR000225 | GO:0005515 | |
Pte2g00761 | 366 | SMART | arm_5 | 320 | 361 | IPR000225 | GO:0005515 | |
Pte2g00761 | 366 | Pfam | U-box domain | 6 | 72 | IPR003613 | GO:0004842|GO:0016567 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte2g00761 | Pte-Chr2 | 6438375 | 6439936 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte2g00761 | 5 | 361 | U-box Gene Family | AT4G21350 | 63.014 | 2.92e-154 | 437 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte2g00761 | - | - | qsa:O6P43_031748 | 550.436 |