Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00761 ATGGAGACTCTGTTACCGGACAATTTCAAGTGTCCAATTTCTCTCGAAATAATGTCTGACCCGGTTATCCTCTCAACGGGTCATACCTTTGACCGGGCTTCCATTCAGCAATGGCTAGACACCGGTAACAGGACATGTCCAATAACCAAACTGCCACTCCCTGATCAGCCTTCCCTCATTCCAAACCATGCTCTAAGAAGCTTGATTTCCAATTATGCCCTAGTCTCCCCGGAGCGGCCAATACTTCAGCCAGAGCCGGAGGCCCTCATCACCACACTCAACTCTCGATCGTGCACTGTCGACTCAAAAATCGAATGTTTGGACCAGCTCACTCGGTTGTCAAAGCGTAACTCGGTGTTCCGCAGGAGGTTGACTGAAGCAGGCGCTGTCTCGGCAGTGCTTCGCTGTGTTGACTCGGATGATATCGCTCTTCAAGAGAAAGCTCTGTTCTTGCTCTTAAACCTTAGTCTGGACGATGATAACAAAGTGGGTTTGGTTGCAGAAGGCGCAGTACGTCGAGTTGTGCCTGTGCTGCTTAGCGGGTCGCAGGACTCCCGAGCTGTAGCCGCGACTTTATTGACGAGTTTGGCTGTTGTGGAAGTGAATAAAGCCACAATTGGGGCTTACCCCCATGCGATTTCTGCGTTGGTTTCACTTCTAAAGGATGGAAAAGCCAGAGAGCAGAAAGAAGCTGCAACAGCCCTCTTCGCCATTTCTTCATTTCCCGATAATCGACGGAGAGCTGTCGAATGTGGAGCAGTACCAGTTTTGATTAGAATTGCTGATTCTGGGCTTGAAAGGGCAGTGGAAGTTCTGGGTACTTTGGCAAAATGCAAGGAAGGTAGGGAAGAGATGGACAAGTATTGTGGGACGCTACCAATTTTAGTAAGAATACTAAGGAATGGTAGCTCAAGAGGAGTACAGTATGCGTTATTGACATTGAACTCTCTCTGTTGCAATAGCAAAGGAATGTGTATAGAGACTGTCAAAGAAGGGGTTCTGGATATCTGTATGGGATTACTGGAAGACGATAATGAAAAAGTTAGGAGGAATGCTTCCAGTTTGATTAAAGTTCTACGTGGAAATTATAGTATGAGATGA 1101 0.4714 METLLPDNFKCPISLEIMSDPVILSTGHTFDRASIQQWLDTGNRTCPITKLPLPDQPSLIPNHALRSLISNYALVSPERPILQPEPEALITTLNSRSCTVDSKIECLDQLTRLSKRNSVFRRRLTEAGAVSAVLRCVDSDDIALQEKALFLLLNLSLDDDNKVGLVAEGAVRRVVPVLLSGSQDSRAVAATLLTSLAVVEVNKATIGAYPHAISALVSLLKDGKAREQKEAATALFAISSFPDNRRRAVECGAVPVLIRIADSGLERAVEVLGTLAKCKEGREEMDKYCGTLPILVRILRNGSSRGVQYALLTLNSLCCNSKGMCIETVKEGVLDICMGLLEDDNEKVRRNASSLIKVLRGNYSMR* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00761 366 SMART Ubox_2 8 72 IPR003613 GO:0004842|GO:0016567
Pte2g00761 366 CDD RING-Ubox_PUB 6 56 IPR045210 -
Pte2g00761 366 FunFam RING-type E3 ubiquitin transferase 4 75 - -
Pte2g00761 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 71 IPR013083 -
Pte2g00761 366 SUPERFAMILY RING/U-box 5 73 - -
Pte2g00761 366 SUPERFAMILY ARM repeat 88 359 IPR016024 -
Pte2g00761 366 ProSiteProfiles U-box domain profile. 4 79 IPR003613 GO:0004842|GO:0016567
Pte2g00761 366 Gene3D - 266 362 IPR011989 -
Pte2g00761 366 Gene3D - 72 265 IPR011989 -
Pte2g00761 366 PANTHER U BOX DOMAIN-CONTAINING 6 358 - -
Pte2g00761 366 SMART arm_5 202 240 IPR000225 GO:0005515
Pte2g00761 366 SMART arm_5 117 157 IPR000225 GO:0005515
Pte2g00761 366 SMART arm_5 278 319 IPR000225 GO:0005515
Pte2g00761 366 SMART arm_5 158 198 IPR000225 GO:0005515
Pte2g00761 366 SMART arm_5 241 277 IPR000225 GO:0005515
Pte2g00761 366 SMART arm_5 320 361 IPR000225 GO:0005515
Pte2g00761 366 Pfam U-box domain 6 72 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00761 Pte-Chr2 6438375 6439936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00761 5 361 U-box Gene Family AT4G21350 63.014 2.92e-154 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00761 - - qsa:O6P43_031748 550.436