Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00759 ATGGCTGAGGAATTCCAAGCTGGTATTTGCAGTGGCAATTGGTGGAACTCATCCAGGAGCGTTCTGTCAACAGGCTTATCTCCATGTTCCTTGGCAATTAATAATGATATAGGGTGCTACAGCCCCTGGCAAACTGATATGGCAGATCACTTGAAGGTGGCAAGATCTTGTGCTGAAGAGTCTAACTCTAACTTGGTATCTGACAACAGCTTTATGGTTTTCCAAGATGTTCATGCTCCAAAACCCTGTAGTACAACTAGCAGTGGTAGAGGTAGCAACTTGAATTATTCCAACTTACAAATGATGGGTTATGGCCTCTCACCCTCATCAACCTCATCAAATTGGAATCAATCTTTGCTTGGTGGAAGAAGTCCTGAAAGCAATATTCATTCCATGGTGGAAGAAAATATGGACACAAAGTTGGAATATAGACGACAAGACATCATAAATGATACCCAAATCCAAAAGGAGGATTGGGATATGGAGACCTTCTCATCTTGTGCAAACCAAGTTTCTCCGATCGATTCATTCAAGCCAATCGCTCATCAAGAATTTGGTTTGGACCAACAAAGTGTGAGTACAGTCACAAGTGGAACCCCGTCTATAGCTGCCCAAGACTCGACGACATCTGGGTTTTCATTAGCCTCAACAAATTCATATGGCTCCTATATACAAAGTTTGTTTGATGCTGATCCTCAACCCCAACCCTCACTTTTCCACAATCAGTCTAGCAATTATTCATCTACTGCAACTTATTCCACCAAGGACTCATCAGCAAATTGGTCTAAGTTTTCTTCCTTCTTGAAGCCCTCAGCTCCGAAGCAGCAAAACGGTGGTTCGGTTTTTGCCAACAATACTCTTTTTTGGAATGCTTCTGCTGCAGCCCTTAATGATATTCGATCTAATATTTTCAATTCGCCGCAATCTCCATATGTTTTGCCAAATGAAGACAAACCAAACCGCTCAACTTCGATTACCAAGTCGAAGACTGAAGAGGTACGTCAAGACAGTACTGAATCAGTTCTGAAGAAAAACACTACTTGTGAACCAGCAATCAAAAGGCCAAGGATTGAAACTCCATCACCATTACCTACTTTTAAGGTCCGGAAAGAGAAGCTTGGGGACAGAATCACTTGCCTTCAGCAGCTAGTGTCACCTTTTGGAAAGACGGACACTGCATCCGTTCTCCATGAAGCAATCGAGTACATCAAGTTTCTCCATGCTCAAGTCAATAATTTGAGTGCTCCTTATATGAAAAGTGGGATTCCCTCTCAGCACCCACAGGGCACTGACACATTGAAAGAAATGGATGACTCAAAGGATCTAAGAAGCCGAGGGCTATGCTTGGTTCCAATTTCAAGTACATACGCAGTTGCTAATGAGACCACTGCTGATTTTTGGACTCCATCATTTGGAAGCACATTCAGGTAG 1431 0.427 MAEEFQAGICSGNWWNSSRSVLSTGLSPCSLAINNDIGCYSPWQTDMADHLKVARSCAEESNSNLVSDNSFMVFQDVHAPKPCSTTSSGRGSNLNYSNLQMMGYGLSPSSTSSNWNQSLLGGRSPESNIHSMVEENMDTKLEYRRQDIINDTQIQKEDWDMETFSSCANQVSPIDSFKPIAHQEFGLDQQSVSTVTSGTPSIAAQDSTTSGFSLASTNSYGSYIQSLFDADPQPQPSLFHNQSSNYSSTATYSTKDSSANWSKFSSFLKPSAPKQQNGGSVFANNTLFWNASAAALNDIRSNIFNSPQSPYVLPNEDKPNRSTSITKSKTEEVRQDSTESVLKKNTTCEPAIKRPRIETPSPLPTFKVRKEKLGDRITCLQQLVSPFGKTDTASVLHEAIEYIKFLHAQVNNLSAPYMKSGIPSQHPQGTDTLKEMDDSKDLRSRGLCLVPISSTYAVANETTADFWTPSFGSTFR* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00759 476 Gene3D - 367 420 IPR036638 GO:0046983
Pte2g00759 476 MobiDBLite consensus disorder prediction 322 339 - -
Pte2g00759 476 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 357 406 IPR011598 GO:0046983
Pte2g00759 476 MobiDBLite consensus disorder prediction 234 257 - -
Pte2g00759 476 CDD bHLH_AtbHLH_like 363 414 IPR045239 -
Pte2g00759 476 FunFam Transcription factor bHLH123 family 367 429 - -
Pte2g00759 476 MobiDBLite consensus disorder prediction 310 363 - -
Pte2g00759 476 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 367 422 IPR036638 GO:0046983
Pte2g00759 476 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 180 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00759 Pte-Chr2 6422313 6424641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00759 235 477 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 47.104 6.00e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00759 - - vvi:100264251 456.447