Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00754 ATGTTCCTTGCGGTATGCCATCCATGGCCACCATCATTGCTAGTTCTAGCTCTGTTTTTCCTCTGTTTCAATATTCCTTCGCATGCAGATGAGCTTCATTCACTTCTGAAGTTCAAATCCGCTTTGCAAAATTCAAATACTGACATTTTCAGCTCTTGGACGCAAGGTAACTCTGTATGCAACTTCACTGGAGTTGTCTGCAATTCTGATAGACACGTTGTAGAGATCAGTCTCTCACAACAACAGCTCACTGGTTATGTGCAATTTGACTTAATCTGTGAGCTGCAGTGGCTCGAGGTACTCTCACTTGGATCAAACTTCTTGCTTGGTTCTATCAAAGAAGACTTGAGGAACTGTACTAATTTGAAGGTCTTGGATTTGGGGGGGAATTCATTCACTGGGGAAGTGCCTGACTTGTCTTCTCTAACCAAGTTGGAGTTCTTGAGTTTAAATGATACTGGGATTTCTGGTTCATTTCCATGGAAATCACTTGAGAATCTTACAGGCCTGAATTTCTTAAGTGTAGGGGATAACTTGTTGAAGCCAAGTCCTTTCCCTATCGAAATACTTAAGCTTGAAAACTTGTATTGGCTTTACCTCACCAATTGCAGCATAACCGGAGAAATCCCAGTCGGTATTGGCAATCTGACACTGCTTGAAAATCTTGAGATTTCTGATAATGATTTGTATGGTGAAATCCCAGATATTGGTAAGCTTCAGAAACTCAAGCAACTTGAACTCTATGACAATCATATAAGTGGTAAATTCCCTAATGTATTTGCTAACCTCACAAATCTCATGAACCTCGACGTTTCATCAAATAAGTTGGAGGGTGATCTTTCTGAGATGAGGTTCTTGACTAACCTCGTATCGTTGCAGCTTTTCGAGAACAATTTCTCTGGGAGAGTACCAGAGGAGTTGGGGGATTTTAAGAACCTCGTGAACATATCCTTGTATAGTAACAAACTCACTGGCTCTCTTCCTAAAAAGCTTGGATCTTCGGCTGGTTTGCAATGCATTGATGTCTCGGACAACTTTCTCTCAGGTCCTATACCACCTGACATGTGCAAGAATGGTAGTATGACTGATTTTCTTATGTTACAGAATCAGTTTACAGGTGGAATACCAGAGAGCTATGTGAATTGCCGTTCTTTAACGCGATTTCGTGTGAATAATAATTCTCTATCAGGTGTGGTTCCTAATGGTATATGGAGTTTGCCCAATTTAGAATTAATTGACCTTTCAATGAACCAGTTTGAAGGACCAATCTCATCTGTAATTGCTAAAGCAAAATCTCTTGCACAATTGCATTTGGAGAACAATCAATTCTCTGGTGAGATACCACCTGAAATTTCTGAGGTTTCTTCTTTGGTTTTGATTCAGCTCAGCTCAAATAAATTCTCAGGTCCTGTTCCTGGCAAAATAGGCAAGTTGACAAAATTGAGCAATCTTTATTTGGATAATAACTTGCTTTCTGGTACCATACCAGACTCAATTGGTTCTTGTCTTTCTTTGAATGTGATAAACCTTGCTGGCAACTCACTTTCTGGGGAGATCCCGGCGAGTCTCGGCTCTCTGCCAACTCTTGATTCGTTGAACTTATCCATGAACAAGCTTTCTGGAAAAATCCCAGAAACTTTGTCACCACAAACACTGACCCTTCTGGACCTATCCAGAAACAGCCTGGTTGGTCCAATTCCACAATCACTCTCCATTCAAGCATTTAATGATAGTTTTGACAGTAACCCGGGCTTATGCAGCAACAGCAATATGTTGCATTTTCAGCCATGTTCGAGGGGATCACAGGCCTCTAGGACTATCCGAACACTGATATTTTGTTTAACTGCAGGGACTCTAGTTGTTCTTCTGGTGGTAATGTGCATCTTGTTCACGAAGTTGAAGCACAATAAAGTTAATCATCCACTGAAACAAGATTCCTGGGCTGTTAGGCCTTATCATGTGCTAACTTTCAGTGAAAGTGAAGTTATTGATGGACTCAAGTCAGAAAATTTGGTAGGAAAAGGAGGTTCAGGGAATGTTTACAAAGTAACACCTAAAAGTGGTAAAGCAATGGCTGTGAAACACATTTGGACTCCAAATCCTGATGACAGAAAATCGTTACGAAGCACATCAGCCATGCTTACAAGAGGGTCTTCGTGTTTGCGCGAATATGATGCAGAAGTAGCAACCCTGAGCTCCATAAGACATGTGAATGTGGTGAAATTGTACTGCAGCATCACAAATGAGCACAGCAACTTGTTAGTTTATGAGTACTTGCCAAATGGAAGCTTATGGGACAGGCTGCACACAAGCGAAAAGATTAGTATGGACTGGGAAGTGAGATATGAAATTGCATTGGGGTCTGCAAAGGGATTGGAATATCTCCATCACGGTTGTAATAGACCGGTTATACACCGTGACGTGAAATCTAGCAATATCTTGTTGGATGAAGACTTGAAGCCACGGATCGCTGACTTCGGGCTTGCCAAGATTGTGCATGCCGGAGGAGATCAGTGGACTCATGCAATTGCTGGAACTCATGGATACATAGCACCTGGTAAGTTGTCACTTCCTTTGAAATATAAGAATTGA 2592 0.4136 MFLAVCHPWPPSLLVLALFFLCFNIPSHADELHSLLKFKSALQNSNTDIFSSWTQGNSVCNFTGVVCNSDRHVVEISLSQQQLTGYVQFDLICELQWLEVLSLGSNFLLGSIKEDLRNCTNLKVLDLGGNSFTGEVPDLSSLTKLEFLSLNDTGISGSFPWKSLENLTGLNFLSVGDNLLKPSPFPIEILKLENLYWLYLTNCSITGEIPVGIGNLTLLENLEISDNDLYGEIPDIGKLQKLKQLELYDNHISGKFPNVFANLTNLMNLDVSSNKLEGDLSEMRFLTNLVSLQLFENNFSGRVPEELGDFKNLVNISLYSNKLTGSLPKKLGSSAGLQCIDVSDNFLSGPIPPDMCKNGSMTDFLMLQNQFTGGIPESYVNCRSLTRFRVNNNSLSGVVPNGIWSLPNLELIDLSMNQFEGPISSVIAKAKSLAQLHLENNQFSGEIPPEISEVSSLVLIQLSSNKFSGPVPGKIGKLTKLSNLYLDNNLLSGTIPDSIGSCLSLNVINLAGNSLSGEIPASLGSLPTLDSLNLSMNKLSGKIPETLSPQTLTLLDLSRNSLVGPIPQSLSIQAFNDSFDSNPGLCSNSNMLHFQPCSRGSQASRTIRTLIFCLTAGTLVVLLVVMCILFTKLKHNKVNHPLKQDSWAVRPYHVLTFSESEVIDGLKSENLVGKGGSGNVYKVTPKSGKAMAVKHIWTPNPDDRKSLRSTSAMLTRGSSCLREYDAEVATLSSIRHVNVVKLYCSITNEHSNLLVYEYLPNGSLWDRLHTSEKISMDWEVRYEIALGSAKGLEYLHHGCNRPVIHRDVKSSNILLDEDLKPRIADFGLAKIVHAGGDQWTHAIAGTHGYIAPGKLSLPLKYKN* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00754 863 ProSiteProfiles Protein kinase domain profile. 666 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00754 863 Gene3D Transferase(Phosphotransferase) domain 1 656 861 - -
Pte2g00754 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Pte2g00754 863 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Pte2g00754 863 SMART LRR_sd22_2 310 339 - -
Pte2g00754 863 SMART LRR_sd22_2 263 282 - -
Pte2g00754 863 SMART LRR_sd22_2 95 118 - -
Pte2g00754 863 SMART LRR_sd22_2 142 169 - -
Pte2g00754 863 SMART LRR_sd22_2 239 261 - -
Pte2g00754 863 ProSiteProfiles Leucine-rich repeat profile. 121 143 IPR001611 GO:0005515
Pte2g00754 863 Gene3D Ribonuclease Inhibitor 284 605 IPR032675 -
Pte2g00754 863 Pfam Leucine Rich Repeat 121 138 IPR001611 GO:0005515
Pte2g00754 863 Pfam Protein kinase domain 668 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00754 863 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Pte2g00754 863 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Pte2g00754 863 SUPERFAMILY L domain-like 284 586 - -
Pte2g00754 863 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 186 855 - -
Pte2g00754 863 FunFam Receptor-like protein kinase 7 112 361 - -
Pte2g00754 863 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pte2g00754 863 SUPERFAMILY L domain-like 60 355 - -
Pte2g00754 863 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 362 601 - -
Pte2g00754 863 SMART LRR_typ_2 526 554 IPR003591 -
Pte2g00754 863 SMART LRR_typ_2 478 502 IPR003591 -
Pte2g00754 863 SMART LRR_typ_2 192 216 IPR003591 -
Pte2g00754 863 SMART LRR_typ_2 239 262 IPR003591 -
Pte2g00754 863 SMART LRR_typ_2 286 310 IPR003591 -
Pte2g00754 863 SUPERFAMILY Protein kinase-like (PK-like) 649 852 IPR011009 -
Pte2g00754 863 SMART serkin_6 666 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00754 863 FunFam Protein kinase superfamily protein 759 831 - -
Pte2g00754 863 Gene3D Ribonuclease Inhibitor 185 283 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00754 Pte-Chr2 6383820 6386411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00754 20 854 Receptor kinase-like Gene Family AT1G09970 55.279 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte2g00754 Pkinase 8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00754 - - qlo:115968334 1102.43