Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00750 ATGGAAATTTCATCTGCTAGAGGTTTCTCTGAAGTGGGAATGATGGATCCTTGCTTCATCAACCAGTGGCACTTAGCCTCTTATGATGAGCCTACCATGCTGCCAATAGCTTCTGCTTTTGGAGAGACCTTGCACCAATCATCACCTTACCAAAACTTGAATCACAAAGCTACAATGGAACGTTCAGAGACTTTCAGTAACAGACCAACAAAGCAGCTCAAGACCAACAGCTGGGGTTCAGGAAAAACTGATCAGATATCAAATTCGCAGTTCTCTTCTTCTGAAAATGTTCTTTCCTTTGTTGATTCAAACTACATGAATCATGCGTCTATGGTGAAACCTAAGGAGGAGATTACGTACCACAACAGCAATGGCTCAACTTCATCTGATGTTCTATTGCCCAAAGGGTCTGTTGGAAATGAAAGCTACATATTCAGCTCCTGTCAGAGCACAAAACGGTTTAGTTCTCAAGCACAAGATCACATCATAGCTGAGAGAAAGCGCAGAGAAAAGCTTAGTCAGCGTTTCATAGCTCTATCTGCACTTGTTCCTGGCCTCAAGAAGATGGACAAGGCTTCGGTTCTTGGAGATGCTGTCAAGTACATGAAGCATTTACAAGAAAAAGTGAAGACCCTTGAGGAGGAGCAGACCAAGAAGGAATGCACTGAGTCAGTGGTCATTGTGAAGAAAAGTCTGCTTTCAGCTGATTCAGATTGTCTCTCAGATGTTCGTGACCCTTTGGAGGAGAAACTGCCAGAAATCGAAGCCAGATTCTGTGATAAGAGTGTCCTCATTAGAGTTCACTGTGAGAAAAAGAAAGGTGTCACAGAGAAAATAGCCATTGAAATTGAGAAGCTGCACCTAACAGTTATCAATAGCAGTGCCTTGGCATTCGGGACTTCGGCTCTTGATATAACAATTATCGCTCAGGTAAACTTCAGGCCTTGGACGTAG 954 0.4319 MEISSARGFSEVGMMDPCFINQWHLASYDEPTMLPIASAFGETLHQSSPYQNLNHKATMERSETFSNRPTKQLKTNSWGSGKTDQISNSQFSSSENVLSFVDSNYMNHASMVKPKEEITYHNSNGSTSSDVLLPKGSVGNESYIFSSCQSTKRFSSQAQDHIIAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAVKYMKHLQEKVKTLEEEQTKKECTESVVIVKKSLLSADSDCLSDVRDPLEEKLPEIEARFCDKSVLIRVHCEKKKGVTEKIAIEIEKLHLTVINSSALAFGTSALDITIIAQVNFRPWT* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00750 317 Coils Coil 195 222 - -
Pte2g00750 317 Gene3D - 155 227 IPR036638 GO:0046983
Pte2g00750 317 CDD bHLH_AtNAI1_like 156 231 - -
Pte2g00750 317 SMART finulus 162 211 IPR011598 GO:0046983
Pte2g00750 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 218 IPR036638 GO:0046983
Pte2g00750 317 PANTHER BHLH TRANSCRIPTION FACTOR 44 312 - -
Pte2g00750 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Pte2g00750 317 MobiDBLite consensus disorder prediction 61 88 - -
Pte2g00750 317 FunFam Basic helix-loop-helix family protein 153 222 - -
Pte2g00750 317 Pfam Helix-loop-helix DNA-binding domain 159 206 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00750 Pte-Chr2 6371042 6373185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00750 1 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.114 6.01e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g00750 HLH 7.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00750 - - qsa:O6P43_031702 361.688