Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00738 ATGGAAATTTCATCTGCTAGAGGTTTCTCTGAAGTGGGAATGATGGATCCTTGCTTCATCAACCAGTGGCAATTAGCCTCTTATGATGAGCCTACCATGCTGCCAATAGCTTCTGCTTTTGGAGAGACCTTGCACCAATCATCACCTTACCAAAACTTGAATCACAAAGCTACAATGGAACGTTCAGAGACTTTCAGTAACAGACCAACAAAGCAGCTCAAGACCAACAGCTGGGGTTCAGGAAAAACTGATCAGATATCAAATTCGCAGTTCTCTTCTTCTGAAAATGTTCTTTCCTTTGTTGATTCAAACTACATGAATCATGCGTCTATGGTGAAACCTAAGGAGGAGATTACGTACCACAACAGCAATGGCTCAACTTCATCTGATGTTCTATTGCCCAAAGGGTCTGTTGGAAATGAAAGCTACATATTCAGCTCCTGTCAGAGCACAAAACGGTTTAGTTCTCAAGCACAAGATCACATCATAGCTGAGAGAAAGCGCAGAGAAAAGCTTAGTCAGCGTTTCATAGCTCTATCTGCACTTGTTCCTGGCCTCAAGAAGATGGACAAGGCTTCGGTTCTTGGAGATGCTGTCAAGTACATGAAGCATTTACAAGAAAAAGTGAAGACCCTTGAGGAGGAGCAGACCAAGAAGGAATGCACTGAGTCAGTGATCATTGTGAAGAAAAGTCTGCTTTCAGCTGATTCAGATTGTCTCTCAGATGTTCGTGACCCTTTGGAGGAGAAACTGCCAGAAATCGAAGCCAGATTCTGTGATAAGAGTGTCCTCATTAGAGTTCACTGTGAGAAAAAGAAAGGTGTCACAGAGAAAATAGCCATTGAAATTGAGAAGCTGCACCTAACAGTTATCAATATCAGTGCCTTGGCATTCGGGACTTCGGCTCTTGATATAACAATTATCGCTCAGATGGATAAGGAATTTTGCATGACACTGAAGAATTTTGTGAAGAATCTACGTGCAGCTTTCAAATCATTCATGTGA 1005 0.4209 MEISSARGFSEVGMMDPCFINQWQLASYDEPTMLPIASAFGETLHQSSPYQNLNHKATMERSETFSNRPTKQLKTNSWGSGKTDQISNSQFSSSENVLSFVDSNYMNHASMVKPKEEITYHNSNGSTSSDVLLPKGSVGNESYIFSSCQSTKRFSSQAQDHIIAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAVKYMKHLQEKVKTLEEEQTKKECTESVIIVKKSLLSADSDCLSDVRDPLEEKLPEIEARFCDKSVLIRVHCEKKKGVTEKIAIEIEKLHLTVINISALAFGTSALDITIIAQMDKEFCMTLKNFVKNLRAAFKSFM* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00738 334 Coils Coil 195 222 - -
Pte2g00738 334 CDD bHLH_AtNAI1_like 156 230 - -
Pte2g00738 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 218 IPR036638 GO:0046983
Pte2g00738 334 SMART finulus 162 211 IPR011598 GO:0046983
Pte2g00738 334 Pfam Helix-loop-helix DNA-binding domain 159 206 IPR011598 GO:0046983
Pte2g00738 334 FunFam Basic helix-loop-helix family protein 153 222 - -
Pte2g00738 334 Gene3D - 155 226 IPR036638 GO:0046983
Pte2g00738 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Pte2g00738 334 MobiDBLite consensus disorder prediction 61 88 - -
Pte2g00738 334 PANTHER BHLH TRANSCRIPTION FACTOR 44 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00738 Pte-Chr2 6062414 6064542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00738 1 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.340 2.04e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte2g00738 HLH 8.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00738 - - qsa:O6P43_031702 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00738 2 6062414 6064542 Pte2g00738 2 6062414 6064542 RCT