Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00724 ATGCTGCGAGTTTCTTTTCTACGAGCGAAGAAGTTGAAGGCTTTGAAGCCTCAGATCTTTGCTTTCTATGAAAACTCTCACTTCTCTACAGTAGCCGAGCCTTCTTCCAGACAACGGAATCCTCAAAAGGTTCCAAATCTTATTGGGGGCATATTTTCTGATTCAAAATCAACGGATTTTATTGATGTTAGAAACCCTGCAACACAAGAAGTTGTTTCCCAAGTTCCTTTGACTACAAATGAGGAATTTAAAGCTGCAGTAGCTGCTGCAAAGCAGGCATTTCCATCGTGGCGCAATACACCCGTCACAACGCGGCAGCGTGTAATGCTCAAGCTCCAAGAGCTTATTCGTAGAGATATTGATGAGCTTGCTTTGAATGTCACTACTGAACAAGGAAAGACATTGAAGGACGCACAAGGAGATGTCTTCCGTGGCCTAGAGGTGGTGGAACATGCTTGTGGAATGGCAACTCTGCAAATGGGAGAGTATGTTCCCAACGTGTCACATGGAATTGATACTTTCAGCATTAGAGAGCCTCTTGGTGTTTGTGCAGGAATTTGTCCTTTCAACTTTCCAGCAATGATACCCTTATGGATGTTCCCAGTTGCAGTTACATGCGGAAATACATTTATATTAAAGCCATCGGAGAAAGATCCAGGGGCTTCTGTAATGCTTGCGGAATTAGCAATGGAGGCTGGTTTACCCGATGGTGTCTTAAATATTGTTCATGGTACACATGACATTGTTAATGCTATTTGTGACGATGGCGACATTAAAGCTGTGTCATTTGTGGGTTCAAATATTGCTGGTATGCACATATATGCACGAGCATCTGCAAAAGGTAAACGAGTTCAGTCAAACATGGGGGCCAAAAATCATGCTATAGTCATGCCTGATGCAAATCTTGATGCTACCATAAACTCATTAGTAGCTGCTGGTTTTGGTGCTGCCGGACAAAGGTGCATGGCTTTGAGTACTGTTGTCTTTGTTGGAGGCTCAAAGCTCTGGGAAAATGAGCTGGTGGAGCGAGCCAAGGCTCTTAAAGTAAATGCTGGAATTGAACCTGATACTGACCTTGGTCCAGTGATCAGTAAACAGGCAAAGGAACGGATACACAGATTGATTGAAACAGGGATTGAAAGTGGTGCCAGGATATTGCTTGATGGAAGAAGTATAAAAGTTCCTGGATATGAATCGGGTAATTTTATTGGTCCCACAATCTTATCAGATGTCACAGATGAAATGGAGTGCTACAAGGAGGAAATTTTTGGCCCTGTTCTCCTGTGCATGGAGGCTGACAGCTTAGACCACGCCATTGACATCGTCAATAAAAACAAATACGGAAATGGAGCTTCCATCTTTACAACATCTGGTGTTGCTGCAAGGAAATTCCAGACTGATATTGAGGCTGGACAGGTTGGAATCAACGTTCCTATTCCTGTTCCCTTGCCCTTTTTCTCGTTCACTGGCAACAAGGCCTCGTTTGCTGGCAATCTCAATTTCTATGGCAAAGCTGGAGTTAACTTTTTCACTCAGCTCAAAACAATTACTCAACAATGGAAAGAATCGTCTGGCAGCAGCAGTGTTAATCTGGCAATGCCAACCTCTCAGAAATCTTGA 1620 0.434 MLRVSFLRAKKLKALKPQIFAFYENSHFSTVAEPSSRQRNPQKVPNLIGGIFSDSKSTDFIDVRNPATQEVVSQVPLTTNEEFKAAVAAAKQAFPSWRNTPVTTRQRVMLKLQELIRRDIDELALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVPNVSHGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVMLAELAMEAGLPDGVLNIVHGTHDIVNAICDDGDIKAVSFVGSNIAGMHIYARASAKGKRVQSNMGAKNHAIVMPDANLDATINSLVAAGFGAAGQRCMALSTVVFVGGSKLWENELVERAKALKVNAGIEPDTDLGPVISKQAKERIHRLIETGIESGARILLDGRSIKVPGYESGNFIGPTILSDVTDEMECYKEEIFGPVLLCMEADSLDHAIDIVNKNKYGNGASIFTTSGVAARKFQTDIEAGQVGINVPIPVPLPFFSFTGNKASFAGNLNFYGKAGVNFFTQLKTITQQWKESSGSSSVNLAMPTSQKS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00724 539 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 46 520 IPR010061 GO:0004491
Pte2g00724 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 497 IPR016162 GO:0016491
Pte2g00724 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 289 489 IPR016163 GO:0016620
Pte2g00724 539 SUPERFAMILY ALDH-like 41 521 IPR016161 GO:0016491
Pte2g00724 539 CDD ALDH_F6_MMSDH 44 520 IPR010061 GO:0004491
Pte2g00724 539 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 289 489 - -
Pte2g00724 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 314 325 IPR016160 GO:0016491
Pte2g00724 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 7 536 IPR010061 GO:0004491
Pte2g00724 539 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 48 295 - -
Pte2g00724 539 Pfam Aldehyde dehydrogenase family 54 516 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00724 Pte-Chr2 5904787 5911239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00724 1 504 Aldehyde Dehydrogenase Gene Family AT2G14170 79.167 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00724 K00140 - qsa:O6P43_012446 931.013