LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte2g00701	ATGAATGAAGAGAACTGGTCAATTTTGGATTCTTATGGACATTCGTTTGATCTTTTTGTTTGTGAGATTCACAATCTATTTTTGCGTTTTTGTCTGTTTTGCTTCCAGTTCAATATTGCAAATCCTACTACTGGGTGCCAGAAGAAGCTTGAGATTGATGATGACCAAAAGCTGCGTGCCTTTTTTGACAAGAGAATCTCCCAGGAGGTTCTTGGTGACTCATTGGGGGAGGAGTTCAAGGGCTATGTATTCAAAATCACTGGAGGCTGTGATAAGCAAGGATTTCCCATGAAGCAGGGAGTGCTGACCCCTGGTCGTGTCCGCTTGTTACTTCACAGGGGCACTCCATGCTTCCGTGGTTATGGAAGGCGCAACGGGGAGCGTAGAAGGAAGTCTGTTCGTGGGTGCATCGTTAGCCCAGATCTATCAGTTCTGAACTTGGTGATTGTGAAGAAGGGTGAGAATGACTTACCTGGACTGACAGACATTGAAAAGCCAAGGATGAGAGGTCCTAAGAGAGCATCTAAGATTCGCAAGCTATTCAATCTTTCCAAGGATGATGATGTGAGGAAATATGTCAACACCTACCGTCGTACTTTCACTACAAAGAATGGGAAGAAAGTTAGCAAAGCTCCTAAAATACAGAGACTTGTTACTCCGCTGACCCTCCAAAGAAAGCGTGGAAGAATTGCAGAGAAGAAGAAGAGAGTTGCCAAGGCCAAGTCTGAGGCAGCAGAGTATCAGAAACTCCTTGCTTCCAGGTTGAAGGAGCAGAGGGAACGCCGGAGTGAGAGCTTGGCCAAGAGAAGATCCAAGCTTTCTGGTGCTTCCAAGCCATCTGGCGCAGCTTAG	852	0.4613	MNEENWSILDSYGHSFDLFVCEIHNLFLRFCLFCFQFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVLGDSLGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDIEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKNGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRVAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSGASKPSGAA*	284

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte2g00701	283	Coils	Coil	223	250	-	-
	Pte2g00701	283	Gene3D	-	167	268	-	-
	Pte2g00701	283	MobiDBLite	consensus disorder prediction	253	271	-	-
	Pte2g00701	283	SMART	Ribosomal_S6e_2	35	162	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Pte2g00701	283	Pfam	Ribosomal protein S6e	35	162	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Pte2g00701	283	PANTHER	40S RIBOSOMAL PROTEIN S6	36	273	IPR001377	GO:0003735\|GO:0005840\|GO:0006412
	Pte2g00701	283	ProSitePatterns	Ribosomal protein S6e signature.	86	97	IPR018282	GO:0003735\|GO:0005840\|GO:0006412
	Pte2g00701	283	PIRSF	RPS6e	35	282	IPR014401	GO:0003735\|GO:0005840\|GO:0006412
	Pte2g00701	283	MobiDBLite	consensus disorder prediction	253	283	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte2g00701	Pte-Chr2	5613256	5615031	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte2g00701	35	282	Cytoplasmic Ribosomal Protein Gene Family	AT5G10360	69.880	7.45e-115	327

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte2g00701	K02991		-	mus:103976700	453.751