Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00697 ATGCTTACAATCCCGCCACCACCATATACGGCAATAACCATGTCGTCATCATCATCATCAAACTGCAAAGGTTTGAAATTGGGATCAATCTCTACCATAGACATAGCCACACTCTCACAATCTGAACTCCTGGCACTCTCTCTCACCTCACCTTCGGCCTTCAATTTGAACTCTAATATTGATATTGTCACTCCCAAGATTGACCGTAGCCTTTTCAATGAGAGTGCTGGCTCTCGTCGTCAGACCTACTCCCGACCCCATAAACCCCAATCCACCACCAACACTACTGACTGCCCCACCGGGCATCGCCGTCGTGTAGCGGGGATGATACCTACACCTAAGCTGCCTCCTGTTCCAGCAGATGACCCAGAAAACAAAGAGATCCGGGTGATAATAGATTATCTCAAAGAGTTGATCAAGCAAGATCCGAAATTTGAAGGTGTTGAGCTGAACCCACCAAAGGCAGTGCCTGTTTCAACTGCTTATGGAACTAATTTTGAAGTGAAGGTCGGGATGGGGGATTACCGGAGCAGAGGGGAAATCGATTTGTTGAGATTTGGTGGGGAAAGGAAGAGGAAGAGAGGTAGGAAACCAAAAGTGAAGGTGCATTTGGAGGAGTGCTACAGGGGAATGCAGATGGTGAACAAGAATGGTGTTGTTGTTGACCCTAAGGCTTTAGAGAACGCTGTGGACCCATTTGCTGAGGAGTTGAGGAAGAGGACAGTAGGGTTGCGGAGTGAAGAGGAGTTATTAGGGTTTTTGAGGGATTTAGGTGGCGAATGGGGTAGTAGGCGGAGGAGGAGAAAGATTGTTGATGCAAGTGATTTTGGTGATGTGTTACCAGTTGGTTGGAAACTCCTATTGGGTCTCAAAAGAAAAGATGGTAACGCGTGGATTTATTGCCGTAGATACATTAGCCCACCTGGGAAACAGTTCGTATCCTGCAAAGAAGCTGCATTATACCTCCAGTCACTGTATGGTCAGAATGATACATCATATCCAATCAGCCTGAGAGACGGGAAAACTAAACCGGACAATGAAGTGACACCTGAATGTCATGTTGGTGATGCTGGGGAGGATCATGGTCAAAGGCAAATTCTTTTGACTAGCTTCACTTCACCCACTTCGTCTTTACCAGTTGATCATGAGAAGGAAGTTGCTTTGTTGGGGATCGAAAATCTTGCGGATGTGGAAATACATGACCTATTTGAGTGTCACAAGTGCAACATGACTTTTGATGATAAAGATTCTTATCTGCAGCATCTGTTATCCTTCCACCAAAGGACTACAAGGAGATATCGTCTTGGTTCCTCTGTTGGAGATGGAGTGATAATTAAAGATGGAAAATTTGAATGCCAGTTCTGCCATAAGGTATTCTTAGAAAGGCGTCGGTACAATGGTCACGTTGGGATCCATGTAAGAAATTACGTGAGGGGAGTGGAAGAATCACCAGAGCAAACAAATGTTGGAATGACAATCCAGTCTCCAGCTGACGATGAGCCATCCTTAAAGATATCTAAAATGGAAGCTTTAATTGAAATTGCTCAAAACTCCATTCTGGAAAACTCTACACTGGAGCCTGATAATAGAGCCATTGGAGGTTTCTCGTCTAGTGAATTAAATTTGATTTCCTCGGAGATTGCTGTTTGTGACTTGGGTCATGGCATAAACTTTGGTTCAACTTTTAATGAAGATGAAGTGGAAGATGGCTTGACTGACTGCAAGCTGGATCAAGATTTCAGCCAGCAAGCTACTCAGCATCTAATCAGAAATGACAATTTTGAGAAACTTGATGATGAATCGAGAATTCTAGAAGCCAAGAGACAAAAGATAGAGTCCTTGTTTATATATGAGCAGAATCCTAGTCCAACGGAAGATTATCATGAAACAGGTGATGATGATGCATCGGCTATGGATGGGAATGAAAAATTTGACACGGATCCTGAAGGAATTTCTTCAGGCAAGTTAACTGATCAAACTGTTGACCAGCTCATGTTTGAGGCTGAGAATGAGACAAATTCTACTTGCACTGGCTCCAAGGAAGTGATAGAAGTGTGCTCTGTCAATGTAAAGAATGACAAGAAAGAGCGTTATGTGGAACTGAGGTTGGATGAAATCGAAACCATGGACTATGATGGTGCAAATACTGCTCAAGAATCTCTTGCTGTAACAGATATACCTCTAGATGACGCAACTGGTTGGAAACCTGTCCCTGTATCAAATATGCAGGAGGGTTTGCCAAATGACAGGATGCTGGAATCTGCATATGATTCCTCTGTACATTTTGACACACGAGCCATGTTAAACACGTCCTCCGAGCACCAGCTGACATCTGTTTGTGTATGGTGTGGGATAGAGTTCGACCATGACACTGTGGATTCTGATATACAACCTGGTTCTGTGGGATTTATGTGTCCAGATTGTAAGGCCAAAATCTCTGGGTAA 2445 0.438 MLTIPPPPYTAITMSSSSSSNCKGLKLGSISTIDIATLSQSELLALSLTSPSAFNLNSNIDIVTPKIDRSLFNESAGSRRQTYSRPHKPQSTTNTTDCPTGHRRRVAGMIPTPKLPPVPADDPENKEIRVIIDYLKELIKQDPKFEGVELNPPKAVPVSTAYGTNFEVKVGMGDYRSRGEIDLLRFGGERKRKRGRKPKVKVHLEECYRGMQMVNKNGVVVDPKALENAVDPFAEELRKRTVGLRSEEELLGFLRDLGGEWGSRRRRRKIVDASDFGDVLPVGWKLLLGLKRKDGNAWIYCRRYISPPGKQFVSCKEAALYLQSLYGQNDTSYPISLRDGKTKPDNEVTPECHVGDAGEDHGQRQILLTSFTSPTSSLPVDHEKEVALLGIENLADVEIHDLFECHKCNMTFDDKDSYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRGVEESPEQTNVGMTIQSPADDEPSLKISKMEALIEIAQNSILENSTLEPDNRAIGGFSSSELNLISSEIAVCDLGHGINFGSTFNEDEVEDGLTDCKLDQDFSQQATQHLIRNDNFEKLDDESRILEAKRQKIESLFIYEQNPSPTEDYHETGDDDASAMDGNEKFDTDPEGISSGKLTDQTVDQLMFEAENETNSTCTGSKEVIEVCSVNVKNDKKERYVELRLDEIETMDYDGANTAQESLAVTDIPLDDATGWKPVPVSNMQEGLPNDRMLESAYDSSVHFDTRAMLNTSSEHQLTSVCVWCGIEFDHDTVDSDIQPGSVGFMCPDCKAKISG* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00697 814 ProSitePatterns Zinc finger C2H2 type domain signature. 405 426 IPR013087 -
Pte2g00697 814 MobiDBLite consensus disorder prediction 625 640 - -
Pte2g00697 814 MobiDBLite consensus disorder prediction 74 100 - -
Pte2g00697 814 Gene3D Classic Zinc Finger 390 477 - -
Pte2g00697 814 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 646 814 IPR037472 -
Pte2g00697 814 SMART c2h2final6 403 426 IPR013087 -
Pte2g00697 814 SMART c2h2final6 450 472 IPR013087 -
Pte2g00697 814 ProSiteProfiles Zinc finger C2H2 type domain profile. 450 477 IPR013087 -
Pte2g00697 814 ProSiteProfiles Zinc finger C2H2 type domain profile. 403 431 IPR013087 -
Pte2g00697 814 MobiDBLite consensus disorder prediction 620 640 - -
Pte2g00697 814 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 270 342 IPR001739 GO:0003677
Pte2g00697 814 Coils Coil 594 614 - -
Pte2g00697 814 MobiDBLite consensus disorder prediction 73 103 - -
Pte2g00697 814 ProSitePatterns Zinc finger C2H2 type domain signature. 452 472 IPR013087 -
Pte2g00697 814 SUPERFAMILY DNA-binding domain 276 335 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00697 Pte-Chr2 5564988 5569640 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte2g00697 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00697 - - qsa:O6P43_012364 801.201