Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00682 ATGGCAGCAGCAACATCTGGTGCAGTGTTGAATGGTTTAGGATCTTCCTTCATATGTGGAGGAAACAAAAGGCAAACCCTATTTAATGCTGTCATTGGAGGTAGAATTGGAGCTGCTGTTAGTACCAAAAGAGTCGTTGTTGCGGCTGCTGCTCCTGCAAAGAAGTCTTGGATTCCCGGTGTTAAAACGGGTGGCAATTTCATTGACCCTGAATGGCTAGATGGCTCGCTACCTGGTGACTATGGTTTCGACCCCCTTGGCCTTGGAAAAGACCCTGCATTCCTCAAATGGTACAGAGAAGCTGAGCTCATCCATGGCCGATGGGCAATGGCTGCAGTGGTTGGTATCTTTGTTGGTCAGGCATGGAGTGGAATCCCATGGTTTGAAGCTGGAGCTGACCCTGGTGCAATTGCACCTTTCTCCTTTGGTACACTTCTTGGAACTCAATTACTGCTCATGGGATGGGTAGAAAGTAAAAGATGGGTGGACTTCTTCAATCCTGACTCCCAGTCTGTGGAGTGGGCTACACCTTGGTCACAGACAGCAGAGAACTTCGCTAATGCCACTGGAGACCAAGGCTATCCTGGTGGGAAATTCTTTGACCCCTTGGGTTTGGCAGGAACCCTGAAAGATGGGATTTACATTCCAGATAGAGAGAAACTGGAGAGGTTGAAACTAGCTGAGATTAAACATGCTAGACTTGCTATGCTGGCTATGTTGATTTTTTACTTTGAGGCTGGACAAGGGAAGACCCCTCTTGGTGCTCTTGGCTTGTAA 777 0.4801 MAAATSGAVLNGLGSSFICGGNKRQTLFNAVIGGRIGAAVSTKRVVVAAAAPAKKSWIPGVKTGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGTLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSQTAENFANATGDQGYPGGKFFDPLGLAGTLKDGIYIPDREKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00682 258 SUPERFAMILY Chlorophyll a-b binding protein 69 258 - -
Pte2g00682 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 50 256 IPR001344 GO:0009765|GO:0016020
Pte2g00682 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Pte2g00682 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Pte2g00682 258 FunFam Chlorophyll a-b binding protein, chloroplastic 70 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00682 Pte-Chr2 5404797 5405927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00682 1 259 Chloroplast and Mitochondria Gene Families AT1G15820 80.309 1.42e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00682 K08917 - cave:132178531 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00682 2 5404797 5405927 Pte2g00682 2 5404797 5405927 RCT