Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00670 ATGGCAGATAATAATCCTGTCAACCTGCCACCCGGTTTTCGATTTTATCCGACAGATGAAGAGCTTGTGGTTCACTTCCTTCATAGAAAGGCAGCTCTGCTACCTTGCCACCCTGATGTCATCCCTGATCTTGATCTCTATCCTTATGATCCATGGGAACTTGATGGTAAAGCTTTGGCTGAGGGCAACCAATGGTACTTCTATAGCAGGAGGACACAGAATAGGATAACTGGTAATGGATATTGGAAATCAATGGGGACGGAAGAACCAGTGATTGCTAGCTCGAGCAATAAGAAAGTGGGGATGAAGAAATATTTCATGTTTCATGTTGGAGAAGGTCCTGAAGGCATCAAAACGAATTGGATAATGCATGAATATCGTCTATCAGAGGCTGCTTCCTCTAGTAAGAGGAGAGGATCACATTCCAAAACAGACCATAGTAGATGGGTTGTATGCCGGGTCTATGAGCGTGATGATGACGACGACGACGATAGAACAGAACTGTCATGTTTGGATGAAGTTTTCTTATCATTGGACGATCTTGAAGAAATAAGTCTGCCAAATTAA 567 0.4303 MADNNPVNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLDLYPYDPWELDGKALAEGNQWYFYSRRTQNRITGNGYWKSMGTEEPVIASSSNKKVGMKKYFMFHVGEGPEGIKTNWIMHEYRLSEAASSSKRRGSHSKTDHSRWVVCRVYERDDDDDDDRTELSCLDEVFLSLDDLEEISLPN* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00670 188 Gene3D NAC domain 18 161 IPR036093 GO:0003677|GO:0006355
Pte2g00670 188 ProSiteProfiles NAC domain profile. 9 157 IPR003441 GO:0003677|GO:0006355
Pte2g00670 188 PANTHER NAC TRANSCRIPTION FACTOR 56 9 162 - -
Pte2g00670 188 Pfam No apical meristem (NAM) protein 10 128 IPR003441 GO:0003677|GO:0006355
Pte2g00670 188 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
Pte2g00670 188 FunFam NAC domain-containing protein 104 18 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00670 Pte-Chr2 5277201 5278541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00670 7 157 NAC Transcription Factor Family AT1G52890 48.428 2.96e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte2g00670 NAM 5.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00670 - - qsa:O6P43_012298 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00670 2 5277201 5278541 Pte2g00670 2 5277201 5278541 RCT