Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00663 ATGGTTCGGACTGCTGGCATGTCAAATGGGGATGTATCTCTGAACGAGAAGGTCGAACCTTTGCCTGAGGATTTCGATCCAGTAGCTGTGATCAAAGAGCCTCTTCCGCCAGTGGTTGAATCTGATGGTAGTGTTGTCATTAAAGAAGCTGTAAACGGTGAACAACAGAACGCAACGAAGAAGGAGATTGTGCTGGGAAGGAATGTACACACCATGTGCCTTGAAGTTGTTGAACCGGAGGCTGATGACGAGGTTACTGGTGAAAGGGAAGCTTATATGGCTAGCGTGTTGTCTAGATATAGAAAATCACTGCTTGAAAGGACAAAGCATCATCTGGGTTATCCCTACAATTTAGATTTCGATTATGGGGCACTTAGTCAACTGCAGCATTTCTCAATAAACAATCTTGGTGATCCCTTTATAGAGAGCAACTATGGTGTGCACTCCAGACAGTTTGAAGTGGGTGTGCTGGACTGGTTTGCCCGTCTTTGGGAAATTGAGAGATGTGATTACTGGGGTTATATTACAAATTGTGGCACAGAAGGCAACCTTCATGGGATACTGGTTGGGAGGGAGGTTTTCCCAGATGGGATTCTGTATGCGTCTAGTGAGTCACATTATTCTGTGTTTAAAGCAGCACGGATGTACAGAATGGATTGTGAAAAGATCAAGACTCTGGTCTCTGGTGAAATTGATTGTGAGGATTTAAAGGCTAAACTACTATCTCACAAGGACAAGCCTGCAATCTTAAATGTCAATATAGGAACAACTGTCAAGGGAGCTGTGGATGATCTTGATCTAGTTATAACGACACTTGAAGAAGCAGGATTCACACATGACCGATATTATATTCATTGTGATGGGGCTTTGTTTGGTCTTATGATGCCGTTTGTCAAACGAGCACCTAAAGTATCCTTTAAAAAGCCAATTGGAAGTGTAAGTGTTTCAGGCCACAAATTTGTTGGATGCCCAATGCCTTGTGGCGTGCAAATAACAAGACTGGAGCATATTAATGCCCTTTCAAGGAATGTGGAGTATCTTGCTTCTAGGGATGCCACTATCATGGGCAGTCGCAATGGCCATGCTCCTATATTCCTGTGGTACACCTTGAACCGAAAAGGATATAGAGGTTTCCAGAAAGAAGTTCAAAAGTGCCTGCGAAATGCGCACTACTTGAAGGACTGTCTCCTTTCTGCGGGTATTGGTGCAATGCTTAACGAATTGAGTAGTACAGTTGTGTTTGAGCGACCACAAGATGAAGAATTTGTTCGCAAGTGGCAACTTGCTTGCCAAGGCAATATTGCTCATGTTGTAGTAATGCCTAATATCACCATTGACAAGCTTAATGATTTTATGAATGAGCTTGTGGAGCAGCGTGCTACATGGTTTAAAGATGGAAAATATCAGCCTCCCTGCATTGCAGCTGATGTAGGCAAACAGAATTGCCTCTGCGCATCGCACAAGTGA 1467 0.4349 MVRTAGMSNGDVSLNEKVEPLPEDFDPVAVIKEPLPPVVESDGSVVIKEAVNGEQQNATKKEIVLGRNVHTMCLEVVEPEADDEVTGEREAYMASVLSRYRKSLLERTKHHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIERCDYWGYITNCGTEGNLHGILVGREVFPDGILYASSESHYSVFKAARMYRMDCEKIKTLVSGEIDCEDLKAKLLSHKDKPAILNVNIGTTVKGAVDDLDLVITTLEEAGFTHDRYYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDCLLSAGIGAMLNELSSTVVFERPQDEEFVRKWQLACQGNIAHVVVMPNITIDKLNDFMNELVEQRATWFKDGKYQPPCIAADVGKQNCLCASHK* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00663 488 FunFam Serine decarboxylase 1 127 370 - -
Pte2g00663 488 SUPERFAMILY PLP-dependent transferases 107 460 IPR015424 -
Pte2g00663 488 Gene3D - 126 370 IPR015421 GO:0003824
Pte2g00663 488 Gene3D Aspartate Aminotransferase, domain 1 371 459 IPR015422 GO:0003824
Pte2g00663 488 Pfam Pyridoxal-dependent decarboxylase conserved domain 198 400 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pte2g00663 488 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 312 333 IPR021115 GO:0016831
Pte2g00663 488 PANTHER - 50 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00663 Pte-Chr2 5226329 5230041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00663 254 396 Calmodulin-binding Proteins AT1G65960 26.974 6.59e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00663 K25193 - qsa:O6P43_012276 870.922