Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00655 ATGGATGATGACATTGACATTCAAGCTCTTGTGTTTGACAACGGAACCATGTCAACAAAGGCTGGATATGCTGGTTATGATAAACCAATAGTCGTGTTCCCCACCATTGTTGGTAAACCTAAGTATGGGGCCGCAGCCAACATGATTACATATGTTGGAGACAGCGCCCTGTCGAAAAGGGGTTCCCTTCGATTGATGTGCCCCATTGAACGTGGAATTGTCTCTAATTGGAATGACATGGAGGAGATTTGGCATCATATATTTTTCGATGAACTTCGTGTTGCCCCTGAAGAGTACCCTGTTCTTCTCTCTGACAGGCCACTTAGTCCCTTCTCTCAAAGGGAAAAGATGGTACAAATTATGTTTGAGACTTTCAATGTACCCTCCTTCTATCTTGCTAATCAAGCCGTTCTATCTCTCTTAGCTGTTGGTAATACGGCAGGTGTGGCGGTTGATTGTGGTGATGGTATGGCCTATAGTGTTCCAGTTTTTCAAGGTCATGCTTTATCTTATGCTTCTCGCTGGTTGGACCTTGGTGGCACTGATTTGACAGAATACTTGGCAAAAATGTTGTACTCTAAAGGGTGCAGCCTCTCAAGCTCGGAGGAGGAGATGGTTTGGGTGCGTGACATGAAAGAGAAACTGGGATATGTGGCCCTTGATTATGAAAGAGAGTTGGAGTGTGCAGAAGGAAGGATATCGTCTGATGTTGACAAAAACTACGAGTTGCCTGATGGACAGGCGATCACAATTGGAGCGGAGAGATTCAAATGTCCAGAAGTTATCTTCAAGCCTTATCTGATGGATAAAGATGCTGATGGCATCCATGAAATCACAAACGACTCCATCAAGAAATGTAATGGTGATATCAGGAAGCAGCTCTATGGTAACATTGTCCTTTGTGGTGGATCCACCTTATTCCCTGGCTTTGTTGATAGAATGAGCAAGGAAATTGCATCTCTCCTCGCTCCAAGCAATTCGAACATCAAGGTGCGTGCTCATTCGGAGAGGACATACAGTGCGTGGGTTGGCGGATCTATCTTGGCTTCATTGAGCAGTTTCCAACAGACGTGGATGTCCAAAGGTGAGTACGATGAATCAGGTCCAAGCATTGTTCACAGGAGATGCTCGTCTCCACTGACACTGTAA 1149 0.4508 MDDDIDIQALVFDNGTMSTKAGYAGYDKPIVVFPTIVGKPKYGAAANMITYVGDSALSKRGSLRLMCPIERGIVSNWNDMEEIWHHIFFDELRVAPEEYPVLLSDRPLSPFSQREKMVQIMFETFNVPSFYLANQAVLSLLAVGNTAGVAVDCGDGMAYSVPVFQGHALSYASRWLDLGGTDLTEYLAKMLYSKGCSLSSSEEEMVWVRDMKEKLGYVALDYERELECAEGRISSDVDKNYELPDGQAITIGAERFKCPEVIFKPYLMDKDADGIHEITNDSIKKCNGDIRKQLYGNIVLCGGSTLFPGFVDRMSKEIASLLAPSNSNIKVRAHSERTYSAWVGGSILASLSSFQQTWMSKGEYDESGPSIVHRRCSSPLTL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00655 382 Gene3D - 10 371 - -
Pte2g00655 382 FunFam Actin like 7B 178 272 - -
Pte2g00655 382 Pfam Actin 7 377 IPR004000 -
Pte2g00655 382 SUPERFAMILY Actin-like ATPase domain 6 151 IPR043129 -
Pte2g00655 382 PRINTS Actin signature 28 37 IPR004000 -
Pte2g00655 382 PRINTS Actin signature 82 100 IPR004000 -
Pte2g00655 382 PRINTS Actin signature 47 58 IPR004000 -
Pte2g00655 382 PRINTS Actin signature 113 126 IPR004000 -
Pte2g00655 382 PRINTS Actin signature 237 253 IPR004000 -
Pte2g00655 382 PRINTS Actin signature 138 157 IPR004000 -
Pte2g00655 382 SMART actin_3 7 377 IPR004000 -
Pte2g00655 382 Gene3D - 136 340 - -
Pte2g00655 382 PANTHER ACTIN 9 370 IPR004000 -
Pte2g00655 382 FunFam Actin, alpha skeletal muscle 2 147 - -
Pte2g00655 382 Gene3D Actin; Chain A, domain 4 178 272 - -
Pte2g00655 382 SUPERFAMILY Actin-like ATPase domain 144 377 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00655 Pte-Chr2 5108110 5110270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00655 1 376 Cytoskeleton Gene Families AT5G09810 62.895 4.46e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00655 K10355 - oeu:111369908 468.774