Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00650 ATGGAGTCTGCTCAGGCAAAGAGATACCTAGAAGATATCACGGCCCACAAGCAAGCCATTCCATTCCGTCGTTTCTGTGGTGGTTTTGGCAGGAAAGCTCAGCCAAAGAACAAGCATTGTAATGGACAAGGTCGATGGCCAGTCAAATCTGCAAAGTTCATCATCGATTTGCTCAAGAATGCTGAAAGTAATGCAGAGGTAAAGGCTTTGGATGTGGATGCTCTCTTCATCTCCCACATTCAGGTCAATCAAGCACAAAAACAAAGGCGTCGTACCTATCGTGCCCATGGGAGAATTAACCGTACGTATATTGATTTTTTGTTCGTGGGGTGGTTGTGCCTGTTTGACCTTGTTAACTAA 360 0.45 MESAQAKRYLEDITAHKQAIPFRRFCGGFGRKAQPKNKHCNGQGRWPVKSAKFIIDLLKNAESNAEVKALDVDALFISHIQVNQAQKQRRRTYRAHGRINRTYIDFLFVGWLCLFDLVN* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00650 119 SUPERFAMILY Ribosomal protein L22 2 103 IPR036394 GO:0003735|GO:0005840|GO:0006412
Pte2g00650 119 Gene3D Ribosomal protein L22/L17 1 104 IPR036394 GO:0003735|GO:0005840|GO:0006412
Pte2g00650 119 Pfam Ribosomal protein L22p/L17e 2 101 IPR001063 GO:0003735|GO:0005840|GO:0006412
Pte2g00650 119 CDD Ribosomal_L22 47 101 IPR001063 GO:0003735|GO:0005840|GO:0006412
Pte2g00650 119 PANTHER 60S RIBOSOMAL PROTEIN L17 2 101 IPR005721 GO:0003735|GO:0006412|GO:0015934
Pte2g00650 119 NCBIfam 50S ribosomal protein L22 2 102 IPR005721 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00650 Pte-Chr2 5041851 5042665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00650 5 118 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 71.930 7.08e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00650 K02880 - cpap:110825807 181.8