Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00638 ATGGAAATTAATCTGTCACTTAAGATAGATTCTTCTACGTATGAAAACGAAGAAACACATCAAGAGAACGAGACAAGAGTTAACACCAACCCTCAGGTAGATGGTGGTCAACAAGAGAAATCACAGGAACAACCTGCTGATAAAGAAAAAGAGTTAGAGGCTGCTGAGGGCACATCAGGTGAAGTCGAAGATGAAGAAGCACAAGGTGATGTAGCTTTTCAGTACAGCGCGAAAACAGAAGAGTTAAGTTCGTTCCAAACGGAGATGAACCGCATGAAAGAAGAAAACAAGCTTTTGAGGAAGGCAGTGGAGAAAACAATGGAAGATTATTGCGATCTTCAAATGAAATTTGCAGCCTTGGGGCAAAATAATCATCAGGATCCTCAAGTCTCTCTCTCACTTCAAAGCAATACTCACAACCCCATCGAAGGGCCATCCAAAACTCCGAAAGTCTTAGAAGCTAAGACTCAACGAGCTGCTGCATTTTCATCTGATGATGAGAACGATACGATTGAGGATGAACTGGGTTTGTCATTACTTTTACAACCAAGTCAACATGGAAAGGAGGAAGACAAACAAGAGAGCAAACAAGAATCTGGGAGCTTTCCATCAGTTCCAAATAATAAGAAGCTAAGGACTGAACTGCCATGCGGTATAACTGCAAAGGTTGCATCCCCTCTAAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAGCAACTACAATGAATGATGGTTGCCAATGGAGGAAATATGGGCAGAAAATTGCAAAAGGAAACCCGTGTCCGCGCGCCTACTATCGCTGCACAGTTGCTCCAGGCTGTCCTGTGAGGAAACAGGTACAAAGATGCTTGGAAGACATGTCCATACTGATCACAACCTACGAAGGAACGCATAATCATCCACTACCAGTTGGTGCGACAGCCATGGCTTCCACTACCTCAGCAGCAGCTTCCTTTATGTTGCTAGATTCTGGCAATCCAAATTCAGTTGGCAACTCAAATTTCAACCCAGTGTTCCTTCCTTACAAAAACTTCCATTCAATCAATCCAACTTCTAATAACCTCTCAAACTTTAGAAGAAAAAACTCTTTGGACCCTTCTAAAGGGCTTGTTCTTGATATCACTAATAATCTCATCGATCCCGCTTTGAAATTCCCGAACAACCCTATTGCTAGCTCCTCAATTTCAGCATCTCACTTGGGTTATTCTTGGATTCCAAACAAATCAAGTTGCCAAAGTGGCAATATTTCTATGAAACCTAAGCCCTAG 1275 0.4227 MEINLSLKIDSSTYENEETHQENETRVNTNPQVDGGQQEKSQEQPADKEKELEAAEGTSGEVEDEEAQGDVAFQYSAKTEELSSFQTEMNRMKEENKLLRKAVEKTMEDYCDLQMKFAALGQNNHQDPQVSLSLQSNTHNPIEGPSKTPKVLEAKTQRAAAFSSDDENDTIEDELGLSLLLQPSQHGKEEDKQESKQESGSFPSVPNNKKLRTELPCGITAKVASPLNRKARVSVRARCEATTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTTSAAASFMLLDSGNPNSVGNSNFNPVFLPYKNFHSINPTSNNLSNFRRKNSLDPSKGLVLDITNNLIDPALKFPNNPIASSSISASHLGYSWIPNKSSCQSGNISMKPKP* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00638 424 MobiDBLite consensus disorder prediction 184 209 - -
Pte2g00638 424 MobiDBLite consensus disorder prediction 127 144 - -
Pte2g00638 424 MobiDBLite consensus disorder prediction 41 57 - -
Pte2g00638 424 MobiDBLite consensus disorder prediction 127 151 - -
Pte2g00638 424 Coils Coil 75 109 - -
Pte2g00638 424 MobiDBLite consensus disorder prediction 1 71 - -
Pte2g00638 424 SMART WRKY_cls 244 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g00638 424 Pfam WRKY DNA -binding domain 245 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g00638 424 MobiDBLite consensus disorder prediction 25 40 - -
Pte2g00638 424 FunFam probable WRKY transcription factor 31 229 306 - -
Pte2g00638 424 ProSiteProfiles WRKY domain profile. 239 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g00638 424 Gene3D WRKY domain 229 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte2g00638 424 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 51 393 IPR044810 GO:0003700
Pte2g00638 424 SUPERFAMILY WRKY DNA-binding domain 237 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00638 Pte-Chr2 4953036 4955315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00638 41 328 WRKY Transcription Factor Family AT1G68150 49.485 1.40e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte2g00638 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00638 - - qsa:O6P43_031557 410.609