Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00633 ATGGCTGGTAACGATGACACACAAATGCAACCCCTTGTTATTGAAATCGGAAGCGGGTTAATCAAGGCAGGGTTTGCAGGTGAAGATGCCCCACATGCTGTGTTCCCTGCCGTTGTTGGTAGACCGAGGTTTGGGGCCCCAGCGCACATACGTACTCATGTAGGGCATGACGCCCTCCGGAACAGGGGTGTTCTTCAACTGCAGTACCCAATTGAGCATGGTCTAGTCAGCAATTGGGATGCAATGGAGGAGATTTGGCACCATACTTTCTATGGGGAAGTTCGTGTTGACCCTAAAGAGCAGCCCGTTCTCCTTACAACGGGACCTCTATTCCCCAATCATCAAAAGGAGAAGATGACTCAAATTATGTTTGAAACTTTCAATGTACCTGCCATGTGTGAAGCTAGTCAGGCAGTTCTTTCTCTCTATTCCAGTGGACATGTAACAGGTATTGTGGTTGATTGTGGCGATCGCATGAGCTACAGTGTCCCAGTTTTTGAAGGTAGTGTTTTATCCTATGCGATCCTCTGGTTGGAGCTTGGTGGCTTCGATTTGACAGAGTACTTATTTGACATGTTGAACTCCAGAGGGTACAACCTCTCCAGCTTGGGAGAGCAGCGAGGTTACGTGCGTCAAATGAAAGAGAAACTGGGTTATGTAGCCCTTGATTATGATAGAGAGTTAGAGTCAGAAGAGATAAGGGGATCATCTCCTATAGACAAGAACTACGAATTGCCTGATGGACAGGTGATCACAATTGGAGCGGAGAGATTCAAATGTCCAGAAGTTCTCTTCCAGCCTTATCTGATGGATAAAGATGCTGATGGCATCCATGAAATCACAAATGACTCTATCAAGAAATGTAATGATCAATTCAGGGAGGATCTGTACAAAAATATTGTGCTCTGTGGTGGGTCAACCATGTTCCCTGGCTTTGCTGATAGACTGAGCAAAGAAATCACATCACTTGTCGCTCAAAGCAGCTTGAACATCAGGGTTGTTGCTCCTCCAGAGAGGACTTACAGTTCATGGATCGGCGCTTCAGTCTTAGCTTCTCTAAACACCTTCAAACAAATGTGGATTTCCAAGGCCGAATATGATGAATCGGGTCCTTCCATCGTTCATCGTCGCACACACTTTTGA 1143 0.4602 MAGNDDTQMQPLVIEIGSGLIKAGFAGEDAPHAVFPAVVGRPRFGAPAHIRTHVGHDALRNRGVLQLQYPIEHGLVSNWDAMEEIWHHTFYGEVRVDPKEQPVLLTTGPLFPNHQKEKMTQIMFETFNVPAMCEASQAVLSLYSSGHVTGIVVDCGDRMSYSVPVFEGSVLSYAILWLELGGFDLTEYLFDMLNSRGYNLSSLGEQRGYVRQMKEKLGYVALDYDRELESEEIRGSSPIDKNYELPDGQVITIGAERFKCPEVLFQPYLMDKDADGIHEITNDSIKKCNDQFREDLYKNIVLCGGSTMFPGFADRLSKEITSLVAQSSLNIRVVAPPERTYSSWIGASVLASLNTFKQMWISKAEYDESGPSIVHRRTHF* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00633 380 FunFam Actin like 7B 180 274 - -
Pte2g00633 380 SUPERFAMILY Actin-like ATPase domain 8 153 IPR043129 -
Pte2g00633 380 PANTHER ACTIN 11 372 IPR004000 -
Pte2g00633 380 Gene3D Actin; Chain A, domain 4 180 274 - -
Pte2g00633 380 SUPERFAMILY Actin-like ATPase domain 146 378 IPR043129 -
Pte2g00633 380 PRINTS Actin signature 115 128 IPR004000 -
Pte2g00633 380 PRINTS Actin signature 61 83 IPR004000 -
Pte2g00633 380 PRINTS Actin signature 30 39 IPR004000 -
Pte2g00633 380 PRINTS Actin signature 239 255 IPR004000 -
Pte2g00633 380 PRINTS Actin signature 140 159 IPR004000 -
Pte2g00633 380 FunFam Putative actin-related protein 5 343 371 - -
Pte2g00633 380 CDD NBD_sugar-kinase_HSP70_actin 12 172 - -
Pte2g00633 380 Gene3D - 138 342 - -
Pte2g00633 380 Pfam Actin 8 378 IPR004000 -
Pte2g00633 380 ProSitePatterns Actins signature 2. 360 368 IPR004001 -
Pte2g00633 380 SMART actin_3 9 379 IPR004000 -
Pte2g00633 380 FunFam Actin, alpha skeletal muscle 4 155 - -
Pte2g00633 380 Gene3D - 12 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00633 Pte-Chr2 4922143 4926034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00633 5 377 Cytoskeleton Gene Families AT5G09810 63.660 1.32e-173 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00633 K10355 - oeu:111369908 473.396