Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00631 ATGCCTCTGTCCAAACGAAATAGACAAGTTACTCTGTCAAAGACAAAGAAGAAAGGAAGGGGAAATAAGGAAGCTTTAGTGCATGCTATTTCTGACGCTATCGAGAAGTACAGTTCGGTCTATGTATTCTCTTTTGAGAACATGAGAAATCTCAAGTTTAAAGAGTTCCGGGAACAACTGAAATCTACTAGCAGATTTTTCCTGGGGTCAAACAAAGTTATGCAGGTTGCTTTAGGTCGATCTGCTGCTGATGAAATTCGGCCAAAGCTGAGTAAAGTTTCTAAGCTTCTCCGTGGAGATACCGGACTTTTTTTCACAAATGTGCCTAAAGAAGAAGTTGAGAGGATCTTTAACGAGTATGAAGAACATGAATTCTCGCGAACAGGGAGCATTGCCTCCGAAAAGGTGGAGCTGAAAGAAGGTCCTTTGGAGCAGTTCACTCATGAGATGGAGCCCTTGCTGCGCAAGCAAGGCATGCCAGTGCGGTTGAACAAAGGAGTTGTCGAGTTAATTGCTGATTACGTTGTTTGTGAGGAGGGGAAGCCGCTATCTCCCGAGGCATCTCATATATTGCGTTTTCTTGGAATCAAGATGGCGACCTTTCGACTTCACCTGAGATGCAGATGGTCTAATGGTGATTTTACAGACTACATTGGGGGACCAGATGATTCGGACGTCGAATCTGCCTGA 690 0.4435 MPLSKRNRQVTLSKTKKKGRGNKEALVHAISDAIEKYSSVYVFSFENMRNLKFKEFREQLKSTSRFFLGSNKVMQVALGRSAADEIRPKLSKVSKLLRGDTGLFFTNVPKEEVERIFNEYEEHEFSRTGSIASEKVELKEGPLEQFTHEMEPLLRKQGMPVRLNKGVVELIADYVVCEEGKPLSPEASHILRFLGIKMATFRLHLRCRWSNGDFTDYIGGPDDSDVESA* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00631 229 Pfam Insertion domain in 60S ribosomal protein L10P 127 196 IPR040637 -
Pte2g00631 229 FunFam Ribosome assembly factor mrt4 125 198 - -
Pte2g00631 229 Gene3D - 30 211 IPR043141 -
Pte2g00631 229 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Pte2g00631 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 217 - -
Pte2g00631 229 Pfam Ribosomal protein L10 20 120 IPR001790 -
Pte2g00631 229 CDD Ribosomal_P0_like 22 184 IPR033867 GO:0000027
Pte2g00631 229 Gene3D - 125 198 IPR043164 -
Pte2g00631 229 FunFam Ribosome assembly factor mrt4 29 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00631 Pte-Chr2 4889053 4892417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00631 34 212 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 22.404 4.45e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00631 K14815 - qsa:O6P43_012253 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00631 2 4889053 4892417 Pte2g00631 2 4889053 4892417 RCT