Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00624 ATGGGCAAAGATAGCCATGTTATGTGTCCTCAGCCTGGTGAATGGCTGAAGGGCAAGTTGGTCGGATCAGGGTCTTTTAGCATTGTTCACTTGGCCATGAGCAAAACCACAGGAGGACTGTTTGTTGTGAAGTCGGCACGATCAGCGGCTGGGATTAAGGAATTGGAGAACGAAGCCAAAATTCTCAAGAGTCTGAATTCATCACCGTATATTGTTCAATGCTTGGGGAAAGAATATGTGGAAGAAAATCTCAATGTGTTCATGGAGTATGTTGCAGGGGGTAGTTTGTCAGATGTGGCAGACAAGTTTGGTGGTTCATTAGATGAAGAAGTTGTTCGGTTATATACCAGAGAGATTCTGCAAGGTCTCAAGTTTCTTCATGAAAACGGGGTTGTGCATTGCGACCTTAAATGCAAGAATGTGCTTTTAGGTTCATCTGGGGAACTCAAGTTGGCTGATTTTGGATGTGCAAAGAAACTCAAGGATGCAAGGACTAACAGGCACGTGACGACGAATTCTTGGCAATCTGTCGGAGGGACTCCATTGTGGATGGCTCCTGAAGTTTTGAAAAATGAAAGGCTTGATTTTGGTGCAGATATATGGTCATTGGGATGCACAGTTATTGAAATGGCTACAGGCAAATCTCCATGGGATGGTCATGATTTTTCAAATGCAATGGCTGCAGTTCTGAATATTGCTTGTAGTGATGAGATACCTCAGTTTCCAAATAATTTCTCAGAGGAAGGTCTGGATTTCTTGGCCAAGTGTCTGGAGAGAGACACAACAAAGAGGTGGGGTGCAGTGGAGCTTCTTAACCATCCTTTTGTTTCTTCCAATAATTCAACAAGAACATCAGAGAAAGAATTCAAATATGCTAGCTCACCAGCAAGCATTTTTGAATTCAGAAACTTGGAGGGTGCTTATGATTCAGATGAATCCGAAAGTCAGCTCCATTCCTCAATCTGCAGGAACCCATTCTCTAGATATAGTGAAGAGAAGAAGGGTACGACAAGGTGGCTCCCAGAAGAGAGTATATTTGGTTCATCAGACAATTGGATCACTGTAAGATCTGCACGAAGTTTCAGTGGCTGA 1092 0.4313 MGKDSHVMCPQPGEWLKGKLVGSGSFSIVHLAMSKTTGGLFVVKSARSAAGIKELENEAKILKSLNSSPYIVQCLGKEYVEENLNVFMEYVAGGSLSDVADKFGGSLDEEVVRLYTREILQGLKFLHENGVVHCDLKCKNVLLGSSGELKLADFGCAKKLKDARTNRHVTTNSWQSVGGTPLWMAPEVLKNERLDFGADIWSLGCTVIEMATGKSPWDGHDFSNAMAAVLNIACSDEIPQFPNNFSEEGLDFLAKCLERDTTKRWGAVELLNHPFVSSNNSTRTSEKEFKYASSPASIFEFRNLEGAYDSDESESQLHSSICRNPFSRYSEEKKGTTRWLPEESIFGSSDNWITVRSARSFSG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00624 363 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00624 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Pte2g00624 363 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 15 324 - -
Pte2g00624 363 SUPERFAMILY Protein kinase-like (PK-like) 13 340 IPR011009 -
Pte2g00624 363 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00624 363 Pfam Protein kinase domain 18 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00624 363 Gene3D Transferase(Phosphotransferase) domain 1 13 343 - -
Pte2g00624 363 CDD STKc_MAPKKK 14 276 - -
Pte2g00624 363 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00624 Pte-Chr2 4851143 4852762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00624 15 331 MAP Kinase Kinase Kinase AT4G26890 41.615 8.11e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte2g00624 Pkinase 1.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00624 K20716 - qsa:O6P43_012149 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00624 2 4851143 4852762 Pte2g00624 2 4851143 4852762 RCT