Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00622 ATGGGGAAGAAAAAGACCGAGGATGCTGGAGCTTCAACTAAGTTCAAGGGGAGTGCCAACGCTAAAGATGCAAGAAAAGAAAAAATTTCTGTTTCTGCAATGTTGGCCAGTATGGATGAGAAACCTGATAAACCAAAGAAAGTTACTTCTTCCTCTGCCAAACCTAAAAAAGTAGCTCCAAAGCCTTCAGCATACACTGATGGCATCGATCTTCCTCCTTCAGACGAAGATGATGATGGGGAGGTCTCAGGAGAAGAGCAACTGCTCAATGTGCAAAAACGTTCCAGTCAAAGGTCTGACTTACCCCTTGATGTTTCTATAACAGATAAAGAGTTGAAGAAGCGTGAAAAAAAGGATTTTATTGCTGCTGCTACTGCTGAGATTGCTAAGAAGGAAGCTCTTAAGGATGATCATGATGCTTTCACTGTGGTTATTGGAAGCCGTGCTTCAGTCCTCGATGGACAAGATGAAAGTGATGCTAATGTTAAAGATATAACTGTAGAAAATTTCTCTGTATCAGCTCGAGGGAAGGAGCTTTTGAAAAATGCATCAGTGAGGATATCGCATGGGAAGAGGTATGGCTTGGTTGGGCCAAATGGAAAGGGAAAATCCACATTATTAAAGCTTCTTGCTTGGAGAAAGATACCAGTGCCGAAGAACATTGATGTGCTTTTGGTTGAGCAGGAGGTTGTTGGTGATGATAAAACTGCACTAGAAGCAGTTGTTTCGGCTAATGAAGAACTTGTTAGTATCCGTCAAGAAGTTGAAGCTCTGCAAAATTCTTCTGTTGCAGGAGATACGGCTAAAGATAGAGATGAAGATGAAGATGATGCAGGAGAGAAGCTTGCTGAATTGTATGAAAAATTACAGTTGCTGGGTTCAGATTCTGCTGAAGCTCAGGCATCTAAGATTCTTGCAGGTTTGGGGTTCACCAAGGTGATGCAGGGCCGTGCTACAAAATCATTCAGTGGTGGTTGGAGGATGAGGATTTCTTTAGCTAGAGCTCTTTTTGTGCAACCAACTCTTCTATTGCTTGATGAACCCACAAATCATTTAGACTTGAGAGCTGTTCTGTGGCTGGAGGAGTACTTGTGCCGTTGGAAGAAGACCTTGGTTGTTGTTTCTCATGATCGTGATTTCCTAAACACAGTCTGCAGCGATATTATTCATCTATATGATATGAAACTCCACTTCTACCGTGGAAATTTTGATGATTTTGAAACTGGTTATGAGCAGCGTCGCAAAGAGATGAACAAAAAGTTTGAAATCTATGACAAGCAACTGAAAGCTGCCAAAAGAAGTGGGAACCGTAATCAGCAAGAAAAGGTCAAAGAAAGAGCAAAGAATGCAGCTAAGGAAGCATCCAAGAACAAGGGAAAAGGAAAGGGAACTGTTGATGAAGATGATGTTCCTCCAGAGGCCCCTCAGAAGTGGAGGGATTACACAGTTGAGTTCCATTTTCCAGAACCTACTGAACTTACACCTCCACTCTTGCAGCTTATTGAAGTTAGCTTCAGTTATCCCAACCGAGAGGATTTCAGACTGTCAAATGTTGATGTCGGTATCGATATGGGTACTCGTGTTGCCATCGTTGGACCCAATGGAGCAGGTAAATCTACACTGCTCAATCTCCTTGCTGGAGATTTAGTTCCAAGTGAGGGTGAAGCTCGAAGGAGTCAGAAGTTGAGAATCGGGAGGTACTCTCAACACTTCGTAGACCTCCTCACAATGGATGAAACACCAGTGCAGTACCTTCTTCGTCTGCACCCAGACCAGGAGGGACTTAGCAAACAGGAGGCTGTCCGTGCAAAGCTTGGGAAATTTGGACTGCCCAGCCACAATCATCTTACTCCTATAGCCAAACTCTCTGGAGGACAGAAAGCACGTGTGGTTTTTACTTCAATATCGATGTCAAAGCCCCACATCTTACTCTTTGATGAACCCACAAATCATTTAGACATGCAGAGCATTGACGCCTTGGCTGACGCACTAGAAGAATTTACCGGTGGGGTTGTTCTGGTAAGTCATGATTCAAGATTGATATCTCGTGTTTGTGAGGATGAAGAGAAGAGTGAAATCTGGGTTGTTGAGGATGGGACAGTGAAGAAGTTCCCTGGGACATTTGAGGAATACAAGGACGAGCTGGTGAGAGAAATCAAAGCAGAGGTTGACGACTGA 2178 0.4353 MGKKKTEDAGASTKFKGSANAKDARKEKISVSAMLASMDEKPDKPKKVTSSSAKPKKVAPKPSAYTDGIDLPPSDEDDDGEVSGEEQLLNVQKRSSQRSDLPLDVSITDKELKKREKKDFIAAATAEIAKKEALKDDHDAFTVVIGSRASVLDGQDESDANVKDITVENFSVSARGKELLKNASVRISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVSIRQEVEALQNSSVAGDTAKDRDEDEDDAGEKLAELYEKLQLLGSDSAEAQASKILAGLGFTKVMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSDIIHLYDMKLHFYRGNFDDFETGYEQRRKEMNKKFEIYDKQLKAAKRSGNRNQQEKVKERAKNAAKEASKNKGKGKGTVDEDDVPPEAPQKWRDYTVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEARRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLFDEPTNHLDMQSIDALADALEEFTGGVVLVSHDSRLISRVCEDEEKSEIWVVEDGTVKKFPGTFEEYKDELVREIKAEVDD* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00622 725 ProSitePatterns ABC transporters family signature. 322 336 IPR017871 GO:0005524|GO:0016887
Pte2g00622 725 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 425 IPR003439 GO:0005524
Pte2g00622 725 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 139 718 - -
Pte2g00622 725 CDD ABCF_EF-3 498 700 - -
Pte2g00622 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 410 IPR027417 -
Pte2g00622 725 Gene3D - 469 724 IPR027417 -
Pte2g00622 725 FunFam ABC transporter F family member 4 463 725 - -
Pte2g00622 725 Pfam ABC transporter 180 350 IPR003439 GO:0005524
Pte2g00622 725 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 712 IPR027417 -
Pte2g00622 725 Coils Coil 414 434 - -
Pte2g00622 725 Coils Coil 437 457 - -
Pte2g00622 725 CDD ABCF_EF-3 165 391 - -
Pte2g00622 725 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 498 723 IPR003439 GO:0005524
Pte2g00622 725 FunFam ABC transporter F family member 4 163 446 - -
Pte2g00622 725 MobiDBLite consensus disorder prediction 1 102 - -
Pte2g00622 725 Gene3D - 162 458 IPR027417 -
Pte2g00622 725 SMART AAA_5 524 700 IPR003593 GO:0016887
Pte2g00622 725 SMART AAA_5 189 402 IPR003593 GO:0016887
Pte2g00622 725 Pfam ABC transporter 515 650 IPR003439 GO:0005524
Pte2g00622 725 MobiDBLite consensus disorder prediction 431 475 - -
Pte2g00622 725 Coils Coil 241 261 - -
Pte2g00622 725 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00622 Pte-Chr2 4806781 4810428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00622 497 710 Calmodulin-binding Proteins AT2G36910 27.917 6.93e-13 70.5