Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00620 ATGGGCTGTATGTGCTCAAAAGGAACCTTTGCACATGAATTCGTTTCCAGAAATCATGAAAAAAACAATTTAAAGGCAAACAAATGTTCGAAGCGTCTGGGCCCTTCATTAAGGGGGGAGGAAACTATAATTGAGGGTAACGGTGTTTTAAATGATGCTACTGCAAGGTTGATATCTGGTCCAGCTAGGGAGGGGAACACAAGTTCTGGTACCAGTTCATCAGATGAGGGGGAAAAGCAAACAGACATTATTGTGAAGACATCAAAAACACCCACTCAAAGGCATCTGAATATGCATTCTGGTTCCATTACAGAGCAAGGACAACCCAGGACAGCAAGTTTGACCAAAGGAGAACGAGGAGCACAAATTGTTGCTGGATGGCCTTCTTGGCTGGTTTCAGTTGCAGGGGAAGCCATTAGTGGATGGCTGCCTCGCAAAGCAGACTCCTTCGAGAGGATGGACAAGATAGGACAAGGAACTTACAGCAGTGTGTATAGGGCCCGTGATCTTGAAACAAACAAAATAGTTGCATTGAAGAAGGTTCGATTTGCCAACTTGGATCCAGAAAGTGTTCGATTTATGGCGAGAGAGATTCTTGTTTTGCGAAGGCTTGACCATCCAAATGTCATGAAGCTTGAAGGCCTTATTACATCAAGGGTTTCTGGAAGCTTATACTTGATATTTGATTACATGGAGCATGATCTTGCAGGTCTTGCAGCAAAGCCTGGTATGAAGTTGACCGAAGTACAGATCAAATGTTACATGCAGCAATTACTTCTTGGCCTTGAGCACTGTCATAATCATGGTGTTATTCACCGTGACATCAAGGGATCAAATCTTCTTATCGACAATAATGGCAAGTTAAAGATTGGTGATTTTGGCCTGGCAACCTTTTTCCAATCCCCTCAGACACAACCATTGACAAGTCGTGTAGTAACATTGTGGTACAGACCACCAGAGCTATTGCTTGGAGCTACAAAGTATGGGGTTTCTGTAGATTTGTGGAGTAGTGGTTGCATTCTTGCGGAGTTATTTACTGGGAAACCTATAATGCCTGGACGGACAGAGGTGGAGCAACTTCATAAGATCTTCAAATTGTGTGGATCGCCATCTGAAGAGTACTGGAAGAAGTCAAAATTGCCGCATGCCACAATATTTAAACCTCAACATCCTTATAAGCGTTGTGTTGCTGAGACATTCAAGGATCTTCCTTTATCAGCATTGAGCCTTTTGGAGGTCCTTCTTGATGTAGAACCTGAATGTCGTGGAACAGCTTCTGCAGCTCTGCAGAATGAGTTCTTTACGACGGAGCCACTTCCGTGCACCCCATCAAGTTTGCCAAAGTACCCACCAAGTAAGGAGCTTGATACCAAATTCAGAAATGAGGAGTCCAAAAGGAGAAGAGCTATTGCTGTTGCAGGGTGTGAACAGGAATCAGTTGGTAGAAGTATGAAAGAATCTAAAGCCATCCCCGCTCGTAATGCCAATGCTGAGTTGCAGTCATCTATACTGAAGAGACAAGGTCTTGGTAACCTAAAGAGTGTTAGTGAGCAATTTAATTTTGAAGAGGAAAGTCGTGACGGCTTTTCTGTCGGAGCACCTAAAGGAGCGTCACTAAGTGGTTTATGCCATTCTGGTCAATCAGTGAATTCAAATGCATATGGAACTTCTCAAAATATGGACTTGCCTGGGGCTTTTACAGGACTTGGTGAATCTGAGAGTGTAAGAAATGTTGCAGAATTTAAAAAACAAAGATCTTACCAGCATCTGGGAGCTTCACATCTATCTAGATTTTCCAATTCAGTTGCAATTCGTGGTGATTCTCACTATGTAATCAATGGTGACTCTAGTGTCCATTTTCATGCAAACTACAACCACGAGGATGAAACGTCTGAGAATTTGCTGGACAGAGCAAATCTTTCAAACAAGAAGCATGGACAGCCACATGTGAAGAACCCTACCATGAGTTATGCTGCTAAAAAAAACCGCATGCATTTTTCTGGACCGCTGATGCCTTCTGGTGGAAATGTTGAGGAGATGCTGAAGGAGCATGAAAGGCAAGTACAGAATGCTGTGCGGAAAGCTCGACTTGACAAGGGCAAGCCCAAGAAAGCAACGGATGAACATGGACAAACTGAATCATTACTCCAATTTGTGCAAAATCACAGATGA 2172 0.4319 MGCMCSKGTFAHEFVSRNHEKNNLKANKCSKRLGPSLRGEETIIEGNGVLNDATARLISGPAREGNTSSGTSSSDEGEKQTDIIVKTSKTPTQRHLNMHSGSITEQGQPRTASLTKGERGAQIVAGWPSWLVSVAGEAISGWLPRKADSFERMDKIGQGTYSSVYRARDLETNKIVALKKVRFANLDPESVRFMAREILVLRRLDHPNVMKLEGLITSRVSGSLYLIFDYMEHDLAGLAAKPGMKLTEVQIKCYMQQLLLGLEHCHNHGVIHRDIKGSNLLIDNNGKLKIGDFGLATFFQSPQTQPLTSRVVTLWYRPPELLLGATKYGVSVDLWSSGCILAELFTGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDLPLSALSLLEVLLDVEPECRGTASAALQNEFFTTEPLPCTPSSLPKYPPSKELDTKFRNEESKRRRAIAVAGCEQESVGRSMKESKAIPARNANAELQSSILKRQGLGNLKSVSEQFNFEEESRDGFSVGAPKGASLSGLCHSGQSVNSNAYGTSQNMDLPGAFTGLGESESVRNVAEFKKQRSYQHLGASHLSRFSNSVAIRGDSHYVINGDSSVHFHANYNHEDETSENLLDRANLSNKKHGQPHVKNPTMSYAAKKNRMHFSGPLMPSGGNVEEMLKEHERQVQNAVRKARLDKGKPKKATDEHGQTESLLQFVQNHR* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00620 723 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Pte2g00620 723 ProSiteProfiles Protein kinase domain profile. 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00620 723 FunFam probable serine/threonine-protein kinase At1g54610 233 473 - -
Pte2g00620 723 FunFam probable serine/threonine-protein kinase At1g54610 137 232 - -
Pte2g00620 723 MobiDBLite consensus disorder prediction 694 710 - -
Pte2g00620 723 CDD STKc_CDK9_like 150 434 - -
Pte2g00620 723 MobiDBLite consensus disorder prediction 61 114 - -
Pte2g00620 723 SMART serkin_6 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00620 723 MobiDBLite consensus disorder prediction 59 114 - -
Pte2g00620 723 Pfam Protein kinase domain 150 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00620 723 PANTHER CELL DIVISION PROTEIN KINASE 148 440 - -
Pte2g00620 723 Gene3D Transferase(Phosphotransferase) domain 1 233 474 - -
Pte2g00620 723 MobiDBLite consensus disorder prediction 694 723 - -
Pte2g00620 723 Gene3D Phosphorylase Kinase; domain 1 137 232 - -
Pte2g00620 723 SUPERFAMILY Protein kinase-like (PK-like) 145 441 IPR011009 -
Pte2g00620 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00620 Pte-Chr2 4792102 4800405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00620 142 470 Core Cell Cycle Gene Families AT5G10270 50.427 2.64e-113 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte2g00620 Pkinase 6.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00620 - - qsa:O6P43_031464 929.858