Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00612 ATGGCATCTGCTGGTATCGGAAATGTTGGGGCAGGGAGCTCAAGAGCTGTTAATCGCTTCAGTGGTTCATCCAGCTCGGTGGATTGGCTTGGGAGAGAAATGCTTGAGATGCGATTGAGGGACAAGGTGGAGCAAGAAGAAGAAAGAGATAGTGAACCAGAAATAGTTGACGGTGTAGGTGCCGAAGCAGGAAATGTCATAAGAACTACTATTGGTGGACGAAGTGGTCAGAAACAGACTATTAGCTACATTGCGGAGCATGTGGTTGGAACCGGCTCTTTTGGGGTTGTTTTCCAAGCAAAGTGTAGAGAAACTGGAGAAATTGTTGCTATCAAGAAGGTTCTTCAAGACAAGCGCTTCAAAAATAGGGAGCTACAGATTATGCAGATGTTGGATCATCCAAATATTGTTTCGCTTAAGCATTGCTTCTTCTCAACAACAGACAAAGAAGAACTCTACCTCAATCTCGTTCTTGAATATGTTCCTGAATCTCTTAATCGCATAGCGAGGACTTATAACCGGGTTAACCAGCGAATGCCTTTGATATATGTTAAGCTCTATACGTATCAGGTTTGCAGAGCGCTTGCCTATATACATAAATGCATTGGCATCTGCCACCGCGACATCAAGCCTCAGAATTTACTAGTGAACCCCCATACCCATCAGCTGAAGCTCTGCGACTTTGGGAGTGCAAAAGTCTTGGTAAAAGGAGAACCGAATGTTTCATATATCTGTTCAAGATATTATCGTGCTCCAGAACTCATATTTGGTGCCACGGAGTATACGACTGCCATAGACATATGGTCTACCGGTTGTGTAATGGCTGAATTACTGCTAGGACAGCCCTTGTTTCCTGGCGAGAGTGGTGTCGACCAACTAGTTGAGATCATTAAGGTCCTGGGAACTCCAACTAGGGAAGAGATAAAATGCATGAATCCTAATTATACAGAGTTCAAATTTCCTCAGATAAAGCCTCATCCATGGCACAAGGTATTTCAAAAACGTTTACCCCCAGAAGCAGTAGACCTAGTCTGTAGGTTCTTTCAGTACTCCCCAAATCTTCGATGCACTGCTCTGGAAGCATGTATTCACCCATTTTTTGATGAACTAAGGGACCGAAACACTCGCCTTCCTATTGGCCATCTTCTTCCTCCTCTCTTCAATTTTAAACCACAAGAGCATGCACGCAAGCAGAGCCTATTTATGGCTTTGAACAACTAG 1221 0.439 MASAGIGNVGAGSSRAVNRFSGSSSSVDWLGREMLEMRLRDKVEQEEERDSEPEIVDGVGAEAGNVIRTTIGGRSGQKQTISYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRFKNRELQIMQMLDHPNIVSLKHCFFSTTDKEELYLNLVLEYVPESLNRIARTYNRVNQRMPLIYVKLYTYQVCRALAYIHKCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDRNTRLPIGHLLPPLFNFKPQEHARKQSLFMALNN* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00612 406 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 51 395 - -
Pte2g00612 406 ProSiteProfiles Protein kinase domain profile. 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00612 406 ProSitePatterns Protein kinases ATP-binding region signature. 89 113 IPR017441 GO:0005524
Pte2g00612 406 Gene3D Transferase(Phosphotransferase) domain 1 164 405 - -
Pte2g00612 406 SMART serkin_6 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00612 406 FunFam Shaggy-related protein kinase kappa 163 404 - -
Pte2g00612 406 Gene3D Phosphorylase Kinase; domain 1 68 162 - -
Pte2g00612 406 CDD STKc_GSK3 78 370 IPR039192 -
Pte2g00612 406 FunFam Glycogen synthase kinase-3 beta 68 162 - -
Pte2g00612 406 SUPERFAMILY Protein kinase-like (PK-like) 82 394 IPR011009 -
Pte2g00612 406 Pfam Protein kinase domain 85 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00612 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00612 Pte-Chr2 4720249 4727008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00612 89 375 Core Cell Cycle Gene Families AT1G76540 34.576 1.69e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pte2g00612 Pkinase 3.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00612 K03083 - zju:107412572 753.436