Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00603 ATGGAACTATCAGATTTGCAAAACAACAAGCAAGGCAGCAACACCACCACTACTCACCCCTACCACCACCAACAGCACGAGCATCAGTTACCTTCTTCACTCCTTGTGGTCCCCTTTGATGGCAGACCACCACCACCATCTTCATCATCATCTGCACCAACTGGCGGACCATCAATGGGTCCCTTTATGGGTTCCATTTCTATTCAAGCTGGTTTGGCTCATGGGGTACTTAAACCCACATCAGCTGCAACTGCTACTTCGTCACCTTCTTCTTCCTCTTCGTCATCGTCATCGTCCACTTCGTCTGCTTCTGCACCTCATATTGATGCCTCCCTTGCCATCGCCACCAGATCTGAACCCAACCTGTCATCCCGATCAGGCCTCGTCATCGATTCCTCTAAGAAAACTCAAGTTCAACAGCAGCTGCAGCAGCAGATAACAGTTTCCACTGGGACTGCGACTACTACAGCTGCACCTGCTAAACGTTCTACCAAGGACCGACACACCAAAGTGGATGGCCGTGGGCGTAGAATCCGAATGCCGGCCACTTGTGCTGCGAGAGTGTTCCAATTAACTAGAGAATTGGGTCACAAGTCAGATGGAGAAACCATAGAATGGTTGCTTCAACAGGCGGAGCCGGCTATCGTAGCTGCCACTGGTACTGGTACAATTCCAGCAAATTATTCTACCCTCAATGTTTCGCTTCGTAGCAGTGGGTCTACTCTCTCAGCTCCACCGTCAAAGTCTGCACCTCATACGTTTCATGGTGCTCTGGCTCTGGCTCATCATCCTCACTATGATGAAGGGTTTTCGCACACTCCCTTTGTAGGTTTCCATCCTCATCATCATCAGCAACAGCATCTACACCATTACCAGCATCAGCACCCGTCCCTTCTAATGAGTGCAGATCAGATAGCAGAAGCACTTCCGAGTAGAGGCGGCGGTGGAGATGGTGGTGGGAATGACTCCACAGAGAATTACATTAGAAAACGTTTCAGGGAAGATTTGTTCAAAGATGATAGTCAACCCCAGAATGAGAATGGTGTTGGTGAAGGAAGCTCACCCAAGTCATTCAAAAGCAATTTGCAGTTTTCAAAGCAACGAGAGGTGGCAGGATCGTCTGGGTTGCTAAGGGCATCGAATATATTACCAGGCACAGCCATGTGGGCAGTGGCTCCAGCACCAACCACTGGTGCTGGTAGCACATTTTGGATGCTACCCGTTCCTGCTAGTGCTAGCGGTGGACCTGCAGTAGCAGCCACAGCCACATCTGTTTCTGGTCTATCGGAAACTCAAGGTTGGCCTTTTGTTCCTGCTGCAGCAACTGGGAGTGGAAATACATTACAGTCACCTGTGCAGTTCATGCCAAGGTTTAATCTTCCAGGTAGTCTTGAGTTTCAAGGTGGCCGAGCAAGTACATTACAATTGGGTTCCATGTTAATGCAGCAATCGTCTCAGCATCTTGGTTTGGGAGTGCCAGAGTCGAATATGGAAATGCTTGCTGCTCTGAATGCTTTTTCTAGAGGTGGGTTGAATATGAATATGACTTCTGATCAGGGAAACCATCCATTAGAACATCAGCATCAGCATCAACAACAACATCGGCACCACCTGCGAGCTAATGATAGTGGGGATGAAGCACCGAACAATTCTCAATGA 1659 0.4888 MELSDLQNNKQGSNTTTTHPYHHQQHEHQLPSSLLVVPFDGRPPPPSSSSSAPTGGPSMGPFMGSISIQAGLAHGVLKPTSAATATSSPSSSSSSSSSSTSSASAPHIDASLAIATRSEPNLSSRSGLVIDSSKKTQVQQQLQQQITVSTGTATTTAAPAKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANYSTLNVSLRSSGSTLSAPPSKSAPHTFHGALALAHHPHYDEGFSHTPFVGFHPHHHQQQHLHHYQHQHPSLLMSADQIAEALPSRGGGGDGGGNDSTENYIRKRFREDLFKDDSQPQNENGVGEGSSPKSFKSNLQFSKQREVAGSSGLLRASNILPGTAMWAVAPAPTTGAGSTFWMLPVPASASGGPAVAATATSVSGLSETQGWPFVPAAATGSGNTLQSPVQFMPRFNLPGSLEFQGGRASTLQLGSMLMQQSSQHLGLGVPESNMEMLAALNAFSRGGLNMNMTSDQGNHPLEHQHQHQQQHRHHLRANDSGDEAPNNSQ* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00603 552 MobiDBLite consensus disorder prediction 1 20 - -
Pte2g00603 552 MobiDBLite consensus disorder prediction 342 360 - -
Pte2g00603 552 MobiDBLite consensus disorder prediction 1 66 - -
Pte2g00603 552 MobiDBLite consensus disorder prediction 141 160 - -
Pte2g00603 552 MobiDBLite consensus disorder prediction 81 104 - -
Pte2g00603 552 Pfam TCP family transcription factor 163 288 IPR017887 -
Pte2g00603 552 MobiDBLite consensus disorder prediction 511 552 - -
Pte2g00603 552 ProSiteProfiles TCP domain profile. 164 218 IPR017887 -
Pte2g00603 552 MobiDBLite consensus disorder prediction 334 360 - -
Pte2g00603 552 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 85 500 IPR005333 GO:0003700
Pte2g00603 552 MobiDBLite consensus disorder prediction 141 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00603 Pte-Chr2 4623789 4625447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00603 161 553 TCP Transcription Factor Family AT1G58100 42.184 6.40e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte2g00603 TCP 2.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00603 - - qsu:111997570 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00603 2 4623789 4625447 Pte2g00603 2 4623789 4625447 RCT