Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00602 ATGGCTGAGTTCAATTATGAACAGCTTGTAAAGGCAACTGAGAACTTCTGCATCACAAGGTTAATAGGCAAAGGAAGCCATGGGTTGGTGTACAAGGGCACTCTTGAAGATAACAAGCTTGTCGCTATAAAGAAACAATCTCAAGGCGTTCAATCTCTTCATGACGACTCAAAGCTTGACAATGAAATACATGTGCTTTCTTCTCTCCGAGGAAATCCACATGTGATCCATCTTCTGGGAACTAGCCATGACTTGCTGAACAACAAGTTTCTTGTCATGGAGCTCATGTCCAATGGCTCTCTCCATCACCTGCTACATGTTTCTGATACCCCACCAACATGGCCCAAACGTGTGGAAACCGCCATGCAAATTGCTCGAGCTGTGCAGTTTCTTCATGAAGGCAAGTCTTTGGTAATCCACAGAGACATCAAGTCTTCCAACATCTTGTTTGATTTGAATTGGAATGCAAAGTTGGTGGACTTTGGACTGGCCATTTTGGGATTCAACTCTATGCTCAGCCACCAGATGAGTAAACCTGCAGGGACAATAGGTTATTTGGACCCTTGTTATACTTGTCCTAATAAACTCAGTACAAAGATTGACATATTTAGCTTTGGGGTGGTGCTAATAGAGATTGTAAGTGGTAGGAAGGTTATCGATGTCAGCAAATCACCGGCTTCCATTGTGGATTGGGCTATTCCATTAATCCAAGAACACAGAATAGAAGAAATCTGTGATGCAAGAATTGAATTGCCTCTATGCATGGTAGGGATGATAAGGAGGATTCTTCACATTGCTGCACGTTGTGTCTCACCCAATGAAGAGGTCCGCCCATCCATTGGACAAGTCATTGTTGAAATGGAAAGTTGTTCCATCGAAAAAGTAAGATTTCCAATTTGGACAACAGTGTTAAGAAGTATGGTTCTACTGAGAAAGAGAAGAAAGTTGAGTACTACTGCTACCACTACTACTCATGTGCCTGAAAAATCATGTTCAGCACAAGAAGGTGATGTTTATGCTCAAATTTCAAGTGGGAAGATGCTGCTAAAGGAGATTATTTTTGGCTGA 1068 0.4195 MAEFNYEQLVKATENFCITRLIGKGSHGLVYKGTLEDNKLVAIKKQSQGVQSLHDDSKLDNEIHVLSSLRGNPHVIHLLGTSHDLLNNKFLVMELMSNGSLHHLLHVSDTPPTWPKRVETAMQIARAVQFLHEGKSLVIHRDIKSSNILFDLNWNAKLVDFGLAILGFNSMLSHQMSKPAGTIGYLDPCYTCPNKLSTKIDIFSFGVVLIEIVSGRKVIDVSKSPASIVDWAIPLIQEHRIEEICDARIELPLCMVGMIRRILHIAARCVSPNEEVRPSIGQVIVEMESCSIEKVRFPIWTTVLRSMVLLRKRRKLSTTATTTTHVPEKSCSAQEGDVYAQISSGKMLLKEIIFG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00602 355 FunFam Serine/threonine-protein kinase-like protein At5g23170 96 297 - -
Pte2g00602 355 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Pte2g00602 355 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Pte2g00602 355 SMART serkin_6 16 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00602 355 ProSiteProfiles Protein kinase domain profile. 16 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00602 355 Gene3D Transferase(Phosphotransferase) domain 1 96 297 - -
Pte2g00602 355 Pfam Protein kinase domain 19 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00602 355 PANTHER OS01G0253100 PROTEIN 2 288 - -
Pte2g00602 355 SUPERFAMILY Protein kinase-like (PK-like) 4 315 IPR011009 -
Pte2g00602 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00602 Pte-Chr2 4612839 4614182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00602 4 288 Receptor kinase-like Gene Family AT3G59420 40.550 2.75e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pte2g00602 Pkinase 5.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00602 - - cill:122309152 428.328