Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00600 ATGCAGCTTCCTGTGTTGCTTTCTCTTCTCCTACTCCTTGTTTTTCAACCCAAATTTGCATCTGCGGTTCTCATGTCAGAGTACCGTGCTCTGCTTTCACTGAAATCCGCCATTTCAGATGACCCCGAAACACCACTTTCTTCCTGGAACTCGTCTTCAAACAACGGCCATTGTGCTTGGTTGGGTGTCACGTGTGACTCTAGGAGGCATGTAATCTCGCTTAACCTGTCAAGTTTGAACCTTTCTGGTACACTGTCTGCTGATATTGCTCACCTACCCTTCCTGTTGAACCTCTCCCTAGCTTCCAACCAGTTCTCCGGTCCTATTCCTCCTCAGATATCCACACTCTCTGCGTTGCGATATCTCAACCTCTCTAACAATGTCTTCAATGGCACTTTCCCAACAGAGCTGTCACAGCTCAAGAACCTTCAAGTCCTAGACCTGTACAACAACAATATGACAGGAGAGCTTCCCATTGCAGTGACCCAGATGCCAAACCTCCGTCATTTCCATCTGGGTGGAAACTATTTCTCCGGTCAAATCCCACCGGAGTATGGACAATGGGAAAATCTCGAGTACTTGGCCGTTTCAGGTAACGAGCTTGTTGGGACTATACCGCCGGAGATCGGGAACTTGACGACGCTCCGGGAGCTTTACATCGGGTACTACAACGCCTATGAAGGTGGAATACCACCTGAACTCGGTAACTTGTCTGCGTTGGTGAGGTTGGATGCTGCTAACTGTGGCTTGACCGGTGAGATACCACCAGAGCTTGGAAGACTGCAGAATCTGGATACTCTGTTTCTTCAAGTGAATGCACTTTCTGGGTCTTTGACAACCGAGCTCGGGAATTTAAAGAGCTTGAAATCGTTGGACTTGTCCAACAACATGTTAGTGGGTGAGATTCCAGAGAGCTTTTCACAGCTGAAGAACTTGACTCTCTTGAATCTTTTCAGAAACAAGCTTCATGGAGCTATTCCCGAGTTCATTAGTGAACTGCCACAGTTGGAGGTATTGCAGCTCTGGGAGAACAACTTCACCGGTGTTATCCCTCCAGGTTTGGGTAGAAACGGTAACCTTCGCATTGTTGATCTATCTTCAAACAAATTGACTGGAAACCTACCTCCTGATATGTGTTTAGGGAATAAGCTAGAAACTCTGATAACTTTAGGGAATTTCTTGTTTGGCTCTATCCCGGAATCTCTAGGAAAGTGTGAGTCGCTAAATCGAATACGAATGGGAGAAAATTTTCTCAATGGGACTATACCAAAAGGTTTGTTTGGGCTTCCAAAGCTTTCTCAAGTTGAGTTGCAGGACAACTATCTTTCAGGTGAATTTCCAAATACTGGTAATGGTGCTGTATCTGTTAATCTTGGACAGATTAGTCTGTCTAATAATCAGCTTAGTGGGTCGTTGCCACCAACCATTGGCAATTTTTCTGGAGTTCAGAAGCTCCTTCTTGATGGCAATAAGCTCTCAGGAAGAATACCAGCTGAGATTGGAAAGCTACAGCAGCTTTCCAAGATGGATTTCAGTCATAACAAATTTTCAGGCCCTATTGCACCCGAGATTAGCCAATGCAAGTTATTAACTTTTGTTGATCTTAGTCGTAACAACTTATCTGGGGAGATTCCTAACGAGATAACGAGCATGAGAATATTGAATTACTTGAATCTGTCAAGAAACCATCTATTTGGTAGCATTCCCTCGTCAATTTCTACTATGCAGAGCTTAACAGCCGTTGATTTTTCATACAACAATCTCTCCGGTTTGGTGCCCAGTACTGGTCAATTCAGTTATTTTAACTACACATCTTTCCTCGGCAATCCTGATCTTTGTGGCCCATATTTAGGGCGTTGTAAAGATGGCGTTGCTGATGGTACTCACCAACCTAATGTTAAAGGTCCTCTCTCTGCTTCCTTGAAGCTATTGCTTGTTATTGGATTGCTTGTGTGCTCTATTGCATTTGCAGTTGCAGCAATTATTAAAGCAAGATCATTGAAGAAGGCCACTGATTCCCGTGCTTGGAAATTGACTGCTTTCCAGAGGTTAGATTTCACTGTTGATGATGTCTTGGATTGTCTTAAGGAGGACAACATTATTGGTAAAGGAGGTGCAGGCATTGTCTACAAGGGGTCCATGCCAAATGATGACTACGTTGCTGTGAAAAGGTTGCCTGCAATGAGCAGAGGCTCCTCTCATGATCATGGATTCAATGCTGAGATTCAGACCTTGGGGCAGATTCGCCATAGGCACATTGTCAGGTTGTTGGGTTTTTGCTCAAATCATGAGACCAATCTTCTTGTCTATGAATACATGCCTAATGGAAGTTTGGGTGAGGTTCTTCATGGTAAAAAAGGGGGTCATCTGCACTGGGATACTAGGTACAAGATTGCTGTGGAGGCTGCAAAGGGGCTTTGCTATTTACATCATGATTGTTCCCCACTTATCGTCCATAGGGATGTGAAGTCTAATAATATCCTTCTTGACTCAAACTATGAAGCTCATGTTGCTGATTTTGGCCTTGCCAAGTTCCTACAAGATTCAGGAACATCTGAATGCATGTCTGCCATTGCTGGTTCATATGGATACATTGCCCCAGAATATGCCTACACACTGAAGGTGGATGAGAAAAGCGATGTTTACAGTTTTGGAGTGGTTCTTCTGGAGCTGATAACTGGGCGGAAGCCCGTCGGGGAATTCGGTGATGGTGTAGACATTGTGCAATGGGTCCGAAAAATGACTGACTCAAACAGAGAGGGAGTTCTTAAAATTCTTGATCCAAGACTTCCCTCAGTACCCCTTCATGAAGTGATGCATGTTTTCTATGTTGCCATGCTCTGTGTTGAGGAACAGGCTGTGGAGCGACCAACAATGCGAGAAGTGGTGCAAATTCTGACAGAGCTACCAAAAACACCTAGCTCAAAACAAGGAGACTCAACAGTGACAGAGACTTACCCATCACCAACTACTGCTTCAGAATCTCTATCATGTACTGCTTTGTCTGTTTAG 3012 0.4442 MQLPVLLSLLLLLVFQPKFASAVLMSEYRALLSLKSAISDDPETPLSSWNSSSNNGHCAWLGVTCDSRRHVISLNLSSLNLSGTLSADIAHLPFLLNLSLASNQFSGPIPPQISTLSALRYLNLSNNVFNGTFPTELSQLKNLQVLDLYNNNMTGELPIAVTQMPNLRHFHLGGNYFSGQIPPEYGQWENLEYLAVSGNELVGTIPPEIGNLTTLRELYIGYYNAYEGGIPPELGNLSALVRLDAANCGLTGEIPPELGRLQNLDTLFLQVNALSGSLTTELGNLKSLKSLDLSNNMLVGEIPESFSQLKNLTLLNLFRNKLHGAIPEFISELPQLEVLQLWENNFTGVIPPGLGRNGNLRIVDLSSNKLTGNLPPDMCLGNKLETLITLGNFLFGSIPESLGKCESLNRIRMGENFLNGTIPKGLFGLPKLSQVELQDNYLSGEFPNTGNGAVSVNLGQISLSNNQLSGSLPPTIGNFSGVQKLLLDGNKLSGRIPAEIGKLQQLSKMDFSHNKFSGPIAPEISQCKLLTFVDLSRNNLSGEIPNEITSMRILNYLNLSRNHLFGSIPSSISTMQSLTAVDFSYNNLSGLVPSTGQFSYFNYTSFLGNPDLCGPYLGRCKDGVADGTHQPNVKGPLSASLKLLLVIGLLVCSIAFAVAAIIKARSLKKATDSRAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGSMPNDDYVAVKRLPAMSRGSSHDHGFNAEIQTLGQIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNREGVLKILDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKTPSSKQGDSTVTETYPSPTTASESLSCTALSV* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00600 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Pte2g00600 1003 Gene3D Ribonuclease Inhibitor 225 344 IPR032675 -
Pte2g00600 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 337 624 - -
Pte2g00600 1003 Pfam Leucine Rich Repeat 287 309 IPR001611 GO:0005515
Pte2g00600 1003 SMART serkin_6 695 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00600 1003 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Pte2g00600 1003 MobiDBLite consensus disorder prediction 970 1003 - -
Pte2g00600 1003 SUPERFAMILY RNI-like 73 412 - -
Pte2g00600 1003 SMART LRR_typ_2 116 140 IPR003591 -
Pte2g00600 1003 SMART LRR_typ_2 333 357 IPR003591 -
Pte2g00600 1003 SMART LRR_typ_2 164 188 IPR003591 -
Pte2g00600 1003 SMART LRR_typ_2 285 309 IPR003591 -
Pte2g00600 1003 SMART LRR_typ_2 358 381 IPR003591 -
Pte2g00600 1003 SMART LRR_typ_2 575 598 IPR003591 -
Pte2g00600 1003 Gene3D Ribonuclease Inhibitor 345 624 IPR032675 -
Pte2g00600 1003 SUPERFAMILY L domain-like 302 620 - -
Pte2g00600 1003 Gene3D Phosphorylase Kinase; domain 1 660 772 - -
Pte2g00600 1003 SUPERFAMILY Protein kinase-like (PK-like) 688 966 IPR011009 -
Pte2g00600 1003 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 227 968 - -
Pte2g00600 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 86 329 - -
Pte2g00600 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 773 983 - -
Pte2g00600 1003 Pfam Protein tyrosine and serine/threonine kinase 697 966 IPR001245 GO:0004672|GO:0006468
Pte2g00600 1003 Gene3D Transferase(Phosphotransferase) domain 1 773 986 - -
Pte2g00600 1003 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 664 772 - -
Pte2g00600 1003 ProSiteProfiles Protein kinase domain profile. 695 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00600 1003 Gene3D Ribonuclease Inhibitor 24 224 IPR032675 -
Pte2g00600 1003 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00600 Pte-Chr2 4586642 4591091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00600 19 995 Receptor kinase-like Gene Family AT5G65700 81.339 0.0 1612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte2g00600 PK_Tyr_Ser-Thr 9.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00600 - - qsa:O6P43_033961 1692.17