Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00593 ATGGCCTCCCCCACACGCATTCTGCGCATTGCCTACTCAAAGGAGATTGTAGATGGACAACCAATCTTTGTGTCTTCAAACTGTCTTCCTATCAAGGCATTCAACTTGGAACCTGCAGGACACAAATTCCATTCTGCTGCACTTAGACTTCTCGGTTGTGAAGAAGATCATGGTGATAAAGATGATAAAAAAGTTGCTGATGATAGGGAGCAATCATATTTTCCATCTTCAGATTCCTACGGCAGCAAGGGTAAAAAAAAATCTGGGGATATGCAACAAGATCACTATGCATTATTGGGTTTGAGTCATCTGAGATATCTTGCTACAGAGGAGCAGATTCGTAAAAGCTACCGTGAGACTGCCTTGAGGTATCATCCAGACAAACAAGCTGCACTCCTTTTAGCTGAAGAAACTGAAGCTGCAAAACTGGCAAAAAAGGATGAAATAGAAAGTCATTTCCAGAAAATCCAGGAAGCATATGAGGTTTTGATGGATCCTATGAGGAGAAGAATTTATGATTCCACAGATGAGTTTGATGATGGGATCCCAGTTGACTGTGCCCCACAGGATTTCTTTAAGGTTTTTGGCCCTGTTTTTATGAGAAATGGGCGGTGGTCAGTTAGTCAGCCTGTTCCATCTTTAGGTGATGACAAGACACCAATGGAAGAAGTTGATAATTTTTATAATTTTTGGTACAGCTTTAAAAGCTGGAGAGAGTTTCCACATGCTGATGAATATGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGATGGATGGAAAGGCAAAATGCAAAACTTTCAGAAAGAGCTAGGAAGGATGAATACACAAGAGTACGTTCCCTTGTTGACAATGCATATAAAAGGGATTCAAGGATATTGAAGAGAAAAGAAGAGCAAAAAGCTGAAAAGAAAAGAAAAAAGGAGGCTAAGCATCTGGCTAAAAGACTACAGGAGGAAGAAGCTGCTCGAATTGCTGAAGAGGAGAAGCGCAGGAAGGAGGAGGAGAAAAAAAGGGATGCAGAAGATGCTTTGCATCAGAAGAAGGTGAAGGAAAAAGAGAAGAAGCTTTTGCGAAAAGAGCGCAATCGTCTTCGGGCACTTTCAGGTCCTATTGTAACTCAACATATGCTTAGCCTTTCTGAAGATGATGTTGAAAATCTATGTATGTCATTTAATTTAGAACATCTGAGGAGCTTGTGTGACATGATGGAGGGTAAAGATGCATCAGAACAAGCAAAAGTCCTTAAAGATGCCTGTGGAAGTAATGAAGAATCTGCCAACAAAGATAAGAAGGTAAAACATTTACAGAATGGTTCTGTGATAACTAATGGTAGTTCTCATGTAAGTATCTCTGAGAAGAAGAAGCCGTGGAGTAAAGAGGAGATTGAACTCTTGAAAAAAGGGATGCAGAAATATCCTAAAGGAACTTCACGGAGATGGGAGGTTATTTCAGAATACGTTGGTACTGAAAGAACTGTAGAAGAAACCTTGTTGGCGACAAAGACTGTTCTCCTTCAGAAACCTGACTCTGCAAAAGCTTTTGATGCATTTCTTGAAAAAAGGAAACCAGCACAGTCCATAGCATCTCCACTTTCAACTAGGGAGGAAATTGAAGGGGCATCTTCTCCTCTAGGCTCTGGGAATTGTTCTGCTGTTGGTACAGATGTCTTGGGGAACTCTTCTGGAAAAGGTGGTAGCAACCAAAATTCCAAGGAATCAGTTCCTACTGCAAATGGAGTTGCTTCGGGTAGTACAGAGCAAGATGTATGGTCGCAGGTGCAAGAGAAGGCATTAATTCAGGCTCTAAAAGCTTTCCCTAAGGAAACAAATCAGCGATGGGAAAGAGTTGCAACGGCAGTACCAGGGAAAACTGTGAACCAGTGCAAGAAAAAATTTGCATCTTTGAAGGAGAATTTCAGGAATAAGAAAAGTGCTGTTTAG 1944 0.4115 MASPTRILRIAYSKEIVDGQPIFVSSNCLPIKAFNLEPAGHKFHSAALRLLGCEEDHGDKDDKKVADDREQSYFPSSDSYGSKGKKKSGDMQQDHYALLGLSHLRYLATEEQIRKSYRETALRYHPDKQAALLLAEETEAAKLAKKDEIESHFQKIQEAYEVLMDPMRRRIYDSTDEFDDGIPVDCAPQDFFKVFGPVFMRNGRWSVSQPVPSLGDDKTPMEEVDNFYNFWYSFKSWREFPHADEYDLEQAESRDHRRWMERQNAKLSERARKDEYTRVRSLVDNAYKRDSRILKRKEEQKAEKKRKKEAKHLAKRLQEEEAARIAEEEKRRKEEEKKRDAEDALHQKKVKEKEKKLLRKERNRLRALSGPIVTQHMLSLSEDDVENLCMSFNLEHLRSLCDMMEGKDASEQAKVLKDACGSNEESANKDKKVKHLQNGSVITNGSSHVSISEKKKPWSKEEIELLKKGMQKYPKGTSRRWEVISEYVGTERTVEETLLATKTVLLQKPDSAKAFDAFLEKRKPAQSIASPLSTREEIEGASSPLGSGNCSAVGTDVLGNSSGKGGSNQNSKESVPTANGVASGSTEQDVWSQVQEKALIQALKAFPKETNQRWERVATAVPGKTVNQCKKKFASLKENFRNKKSAV* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00593 647 MobiDBLite consensus disorder prediction 437 452 - -
Pte2g00593 647 Gene3D - 582 647 - -
Pte2g00593 647 SUPERFAMILY Chaperone J-domain 88 172 IPR036869 -
Pte2g00593 647 SUPERFAMILY Homeodomain-like 589 644 IPR009057 -
Pte2g00593 647 ProSiteProfiles Myb-like domain profile. 450 493 IPR001005 -
Pte2g00593 647 Pfam DnaJ domain 94 173 IPR001623 -
Pte2g00593 647 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 10 646 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Pte2g00593 647 MobiDBLite consensus disorder prediction 58 89 - -
Pte2g00593 647 ProSiteProfiles SANT domain profile. 586 641 IPR017884 -
Pte2g00593 647 Gene3D DnaJ domain 78 181 IPR036869 -
Pte2g00593 647 MobiDBLite consensus disorder prediction 526 589 - -
Pte2g00593 647 PRINTS DnaJ domain signature 117 132 IPR001623 -
Pte2g00593 647 PRINTS DnaJ domain signature 148 168 IPR001623 -
Pte2g00593 647 PRINTS DnaJ domain signature 99 117 IPR001623 -
Pte2g00593 647 ProSiteProfiles Myb-like domain profile. 583 637 IPR001005 -
Pte2g00593 647 Pfam Myb-like DNA-binding domain 590 636 IPR001005 -
Pte2g00593 647 Pfam Myb-like DNA-binding domain 455 494 IPR001005 -
Pte2g00593 647 MobiDBLite consensus disorder prediction 313 351 - -
Pte2g00593 647 ProSitePatterns Nt-dnaJ domain signature. 153 172 IPR018253 -
Pte2g00593 647 MobiDBLite consensus disorder prediction 544 589 - -
Pte2g00593 647 CDD SANT 457 496 IPR001005 -
Pte2g00593 647 Coils Coil 300 368 - -
Pte2g00593 647 CDD DnaJ 94 165 IPR001623 -
Pte2g00593 647 SMART dnaj_3 93 168 IPR001623 -
Pte2g00593 647 MobiDBLite consensus disorder prediction 425 455 - -
Pte2g00593 647 SMART sant 454 507 IPR001005 -
Pte2g00593 647 SMART sant 587 639 IPR001005 -
Pte2g00593 647 Gene3D - 450 508 - -
Pte2g00593 647 MobiDBLite consensus disorder prediction 297 351 - -
Pte2g00593 647 CDD SANT 591 637 IPR001005 -
Pte2g00593 647 ProSiteProfiles dnaJ domain profile. 94 176 IPR001623 -
Pte2g00593 647 FunFam Myb family transcription factor 585 645 - -
Pte2g00593 647 SUPERFAMILY Homeodomain-like 450 496 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00593 Pte-Chr2 4537691 4541576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00593 95 294 C2H2 Transcription Factor Family AT1G74250 28.870 1.91e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte2g00593 DnaJ 1.3e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00593 K09522 - pvy:116115139 855.129