Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00590 ATGGCCAGCAATGCTCCCATTGTCCAGACGGTACCCAATGGAAATCAGAAGTTTTCAGCGCCATTGTTCTTGCATGGAGACTTGGAAATGTGGATTTTGGAAGCTAAGTCTCTTCCAAATATGGATTTAGCTTCAGATAACATGAGGAAAGTTTTTACAATGTGCGGTAGTTGTCCTACTCCCATTTGCAATGGACCTAAGACGCTCTCAGGAAAGCACACAAGCAATACAAGTGACCCTTATGTCTCAGTTTGCATAGGAGGGGCTACAATAGCTCAAACTAGAGTAATACCTAACTGTGAGAATCCTTTGTGGGATGAACACTTTTACGTTCCCGTTGCTCACCCTGCTCATAAGCTCGAATTCATCGTCAAGGACAACGATGTTCTTGGCGCAGACCTCATTGGAGTAGTGGAGATACCGGTTCAGAAAATTCTCGTAGGACAAATTATAAATGACTGGTTTCCTGTCATGGGGTATTTTGGAAACTGTTTGAAACCTTATCCTGAATTACATGTCACTGTTCAGTTCACTCCTGTTTTACGTAACCCCTTATACACCTTAGGCATTCGTGATACATCGGAGTACAACGGGGTTTCTGACGCATATTTTCCTCAAAGAAAAGGAGGCAACTTGACACTTTATCAGGATGCACATGTGCCTGATGGTATGCTGCCTGAAATTGAGTTGGACAATGGGAAAGTTTTCCGGCAAGGTCAATGTTGGGAAGAGATATGCCATGCCATTTTAGAAGCACAGAACTTGATTTACATCATTGGCTGGTCTATCTACCACAAAGTAAAGCTTGTGAGGGAACCAACAAAACCATTGCCTTCTGGGGGTGAGCTTTCACTTGGAGATTTGTTGAAATACAAATCACAAGAAGGGGTCCGGGTTCTTATGCTGATTTGGGATGATAAAACTTCGCATGATAAATTCCTCTTCAAAACGGAAGGAGTCATGCGCACCCATGATGAAGAAACTAAAAAATTCTTCAAGAACTCAAACGTTTATTGTGCTCTTTCGCCTCGTTATCCAAGTGACAAACTTAGTATTGTTAAGCAAAAGATTGTGGGAACACTTTTTACTCATCATCAAAAGTGTGTTCTGGTGGACACTCAAGGTTTTGAATCTAAGCGAAAAATTACGGCTTTTATTGGTGGCCTGGATTTGTGTGATGGCAGATATGATACTCCACAGCACAGGCTATTCCAAAATTTAGAGACCATCTTTCAAGATGATTTTCACAATCCCACATTCACATCCAGTTGCAGTTCCCCCAGGCAACCATGGCATGACTTGCATTGCAAAATCGAAGGTCCAGCTGCCTATGATATATTGACTAACTTTGAGCAAAGATGGAGAAAAGCCACAAAATGGCGTGACTTCAAGCTCAAGAGAGTCTCCAGGAAACGTGATGATCCATTGCTAAAGCTTGAACGTATCTCATGGATCCTCACTCCATATCCTGGTCCTGATGGCGATAAACCTGTACGTGTAATAGAAGAAACAGATCCTGAAAATTGGAACGTGCAGGTGTTCAGATCAATAGATTCAGGATCTGTGAAAGGGTTCCCAAAGGGTGTTGATGAAGCAAAGACTCAGCATCTTCTTTGTGGTAAAAACTTGAAAGTGGACAAAAGCATCCATTCTGCATATGTGAATGCCATAAGAACAGCACAGCACTTCATATATATAGAGAATCAATATTTCCTTGGATCTTCATATCATTGGCCTTCTTACAAAAGTGCAGGTGCAGATAACATGGTGCCCATTGAACTGGCTCTAAAAATTGCTAACAAGATCTATGCAAACGAACGGTTTGCTGCCTATGTTGTAATACCAATGTGGCCGGAGGGAGTTCCTAATAGTGCAGCTGTGCAGGAAATCTTGTACTGGCAGGGACAGACAATGGCTATGATGTACAAGATTGTAGCAGAAGCCCTTGAGACAGTAGGTCTTTCTGATGCATATCACCCGCAGGATTACTTGAACTTTTACTGCCTTGGCAAGCGCGAAAGCCCATATATGGATAGCTTACCAAAATTGAATCAGGCAACTGAAAACCGCTCACTGGCAGCAGTTCAAAAATATCGACGTTTTATGATATATGTACATTCCAAAGGTATGATAGTAGACGACGAATACATCATCATGGGATCTGCTAACATTAACCAGAGATCCTTGGACGGGTCAAGGGACACAGAAATTGCAATGGGAGCTTATCAGCCAGAATGTACATGGGGAAAGAACAACTCACTTCCTCATGGCCAGGTATATGGTTACAGGATGTCGCTATGGGCAGAACACCTAGGTGGCATCCATGATTGTTTCAATGAACCACAAAGCCTAGAATGTGTTAACCATATCAACAATATTGCAAGAACTAACTGGGAAGCATATGTATCAGAAGAGGAAAAGCAGTTGAGTGGATACTTGCTTCCATATCCTTTGCAGGTAAGCAATGATGGAAAAATCAGTGCATTGCCTGATTGTGATACTTTTCCAGATGTTGGTGGTAAAATTCTTGGATCACCAACCTCTCTTCCAGATGTATTAACAACATGA 2568 0.4206 MASNAPIVQTVPNGNQKFSAPLFLHGDLEMWILEAKSLPNMDLASDNMRKVFTMCGSCPTPICNGPKTLSGKHTSNTSDPYVSVCIGGATIAQTRVIPNCENPLWDEHFYVPVAHPAHKLEFIVKDNDVLGADLIGVVEIPVQKILVGQIINDWFPVMGYFGNCLKPYPELHVTVQFTPVLRNPLYTLGIRDTSEYNGVSDAYFPQRKGGNLTLYQDAHVPDGMLPEIELDNGKVFRQGQCWEEICHAILEAQNLIYIIGWSIYHKVKLVREPTKPLPSGGELSLGDLLKYKSQEGVRVLMLIWDDKTSHDKFLFKTEGVMRTHDEETKKFFKNSNVYCALSPRYPSDKLSIVKQKIVGTLFTHHQKCVLVDTQGFESKRKITAFIGGLDLCDGRYDTPQHRLFQNLETIFQDDFHNPTFTSSCSSPRQPWHDLHCKIEGPAAYDILTNFEQRWRKATKWRDFKLKRVSRKRDDPLLKLERISWILTPYPGPDGDKPVRVIEETDPENWNVQVFRSIDSGSVKGFPKGVDEAKTQHLLCGKNLKVDKSIHSAYVNAIRTAQHFIYIENQYFLGSSYHWPSYKSAGADNMVPIELALKIANKIYANERFAAYVVIPMWPEGVPNSAAVQEILYWQGQTMAMMYKIVAEALETVGLSDAYHPQDYLNFYCLGKRESPYMDSLPKLNQATENRSLAAVQKYRRFMIYVHSKGMIVDDEYIIMGSANINQRSLDGSRDTEIAMGAYQPECTWGKNNSLPHGQVYGYRMSLWAEHLGGIHDCFNEPQSLECVNHINNIARTNWEAYVSEEEKQLSGYLLPYPLQVSNDGKISALPDCDTFPDVGGKILGSPTSLPDVLTT* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00590 855 SMART pld_4 360 395 IPR001736 GO:0003824
Pte2g00590 855 SMART pld_4 701 728 IPR001736 GO:0003824
Pte2g00590 855 ProSiteProfiles C2 domain profile. 8 155 IPR000008 -
Pte2g00590 855 PANTHER PHOSPHOLIPASE D 23 844 IPR015679 -
Pte2g00590 855 Gene3D Endonuclease Chain A 516 748 - -
Pte2g00590 855 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 701 728 IPR001736 GO:0003824
Pte2g00590 855 SUPERFAMILY Phospholipase D/nuclease 547 787 - -
Pte2g00590 855 Gene3D C2 domain 6 181 IPR035892 -
Pte2g00590 855 SUPERFAMILY Phospholipase D/nuclease 202 464 - -
Pte2g00590 855 Pfam Phospholipase D Active site motif 361 395 IPR001736 GO:0003824
Pte2g00590 855 CDD C2_plant_PLD 20 178 - -
Pte2g00590 855 FunFam Phospholipase D delta 232 474 - -
Pte2g00590 855 Pfam PLD-like domain 694 737 IPR025202 -
Pte2g00590 855 Pfam C2 domain 26 157 IPR000008 -
Pte2g00590 855 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 24 180 IPR035892 -
Pte2g00590 855 Gene3D Endonuclease Chain A 231 479 - -
Pte2g00590 855 Pfam Phospholipase D C terminal 776 845 IPR024632 -
Pte2g00590 855 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 395 IPR001736 GO:0003824
Pte2g00590 855 PIRSF PLD_plant 14 855 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pte2g00590 855 SMART C2_3c 27 154 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00590 Pte-Chr2 4523508 4528280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00590 22 856 Phospholipase D Gene Family (Wang group) AT2G42010 52.839 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00590 K01115 - qsa:O6P43_012204 1348.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00590 2 4523508 4528280 Pte2g00590 2 4523508 4528280 RCT