Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00582 ATGTACTACCTACTAGCTGATCGTTATCCACATGAAGGGCAGACATGGATCGGACAGTTGATCCCAAATTTCAGAGAAACAAGCCTGTGGATCAGATATATCTCAGCTGTCTATTGGTCTATTACCACCATGACCACAGTAGGTTATGGAGACCTGCATGCTGTAAACAATGTGGAAAAGATATTCATCATCTTCTACATGCTCTTCAATCTTGGCTTAACAGCTTATCTCATTGGTAACATGACAAACCTTGTTGTGGAAGGAACTCGCCGCACTATGGAATTCAGAAATAGCATTGAAGCAGCATCGAATTTTGTGTCCCGAAATCGATTACCACCAAGACTGAAACAGCAAATATTAGCATACATGTGCTTGAGATTTAAAGCAGAAAGCTTAAACCAGCATCAGCTTATTGAACAGCTACCAAAGTCAATCTGCAAAAGCATCTGTCAGCATCTGTTTTTGCCTACAGTGGAGAAGGTTTATCTTTTCAAAGGCATCTCAAGAGAAATTCTCCTGTCCTTGGTTGCACAGATGAAAGCAGAATATATTCCACCTAGAGAAGACATGATCATACAAAATGAAGGACCTGATGATGTATATGTTATAGTATCTGGGGAAGTTGAAATCATTGACAATGAAATGGATAAAGAGAAAGTAGTGGGGACTTTGCAAACAGGAGACATGTTCGGTGAAGTTGGCGCACTTTGCTGCAGACCTCAGAGCTATACGTATAGAACTAAGACACTCTCACAACTCTTGAGGCTCAAAACAAATGTTCTCATAGAAGCAATGCAGACTAAACGAGAAGACAATGTCAGGATGCTCAAGAACTTTCTCCAGCACTACAAGAAGCTAAAGGATCTGAGCATAAGGGATTTGCTAGTGGAGGGTTGCGAAGAGGAAGATGACCCAAATATGGCTATCAACCTACTAAGTGTTGCTAGTACAGGCAATGCTGCTTTTCTTGATGAGCTTCTCAAGGCAGGATTGGATCCTGACATTGGAGACTCAAAAGGGAGAACCCCCTTGCACATAGCAGCATCAAATGGACATGAGGAATGTGTCTTTGTCTTACTTAAGCATGGGTGCAATGTACATTCACGAGACATCAATGGCAACACTGCATTATGGGATGCTCTATCATCAAAGCACTATTCCATATTCCAAATTCTCTTCCATCGTGCTGTCGCCTCTGATCCATATGCTGCAGGTAATCTCCTCTGTACGGCTGCCAAAAGAAATGATTTGACAGTAATGAATGAGCTCCTAAAGCAAGGATTAAACGTAGACTCGAAAAATGGCCACGGTTTAACTGCAACCAAGATTGCGTTGTCTGAAAATAACGCTGAGATGGTTAATTTATTAGTCATGTATGGTGCAACTGTAGCAGACATAGACACTTGTGGTTTTCCAGCATCCACCTTGGCTGAAATACTGCAGAAGAGAGAAATTGGACACAGAATTTCCGTACAAGATACTGCAGAGAATAAATATCCAAACACGCATGAAGAACAGCAGGAATATCTTTCTTGGGGAAGATCAAGTAGTACTCCATACTATCCTAGAGTAAGTATATACAGAACCCATCCTATGGAGAGAAAAGAAAAATGTTGCAGGGAATCTGGGAGGTTGATAAGGTTGCCAAATTCACTAGAAGAACTTAAGAACATTGCAGGTGAGAAGTTTGGATTTGATGCAAAGGATTCAACGGTGACTAATGAAGAAGGAGCAGAAATAGACTCCATTGATGTGATTAGAGATAATGACAAACTTTTCATTGTTGAAGATTCAATTTAA 1800 0.4072 MYYLLADRYPHEGQTWIGQLIPNFRETSLWIRYISAVYWSITTMTTVGYGDLHAVNNVEKIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVSRNRLPPRLKQQILAYMCLRFKAESLNQHQLIEQLPKSICKSICQHLFLPTVEKVYLFKGISREILLSLVAQMKAEYIPPREDMIIQNEGPDDVYVIVSGEVEIIDNEMDKEKVVGTLQTGDMFGEVGALCCRPQSYTYRTKTLSQLLRLKTNVLIEAMQTKREDNVRMLKNFLQHYKKLKDLSIRDLLVEGCEEEDDPNMAINLLSVASTGNAAFLDELLKAGLDPDIGDSKGRTPLHIAASNGHEECVFVLLKHGCNVHSRDINGNTALWDALSSKHYSIFQILFHRAVASDPYAAGNLLCTAAKRNDLTVMNELLKQGLNVDSKNGHGLTATKIALSENNAEMVNLLVMYGATVADIDTCGFPASTLAEILQKREIGHRISVQDTAENKYPNTHEEQQEYLSWGRSSSTPYYPRVSIYRTHPMERKEKCCRESGRLIRLPNSLEELKNIAGEKFGFDAKDSTVTNEEGAEIDSIDVIRDNDKLFIVEDSI* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00582 599 SUPERFAMILY cAMP-binding domain-like 90 281 IPR018490 -
Pte2g00582 599 Pfam Ankyrin repeats (3 copies) 315 395 IPR002110 GO:0005515
Pte2g00582 599 Gene3D Jelly Rolls 156 294 IPR014710 -
Pte2g00582 599 ProSiteProfiles cAMP/cGMP binding motif profile. 163 282 IPR000595 -
Pte2g00582 599 SMART ANK_2a 436 465 IPR002110 GO:0005515
Pte2g00582 599 SMART ANK_2a 339 368 IPR002110 GO:0005515
Pte2g00582 599 SMART ANK_2a 306 335 IPR002110 GO:0005515
Pte2g00582 599 SMART ANK_2a 406 432 IPR002110 GO:0005515
Pte2g00582 599 SMART ANK_2a 372 403 IPR002110 GO:0005515
Pte2g00582 599 SMART ANK_2a 256 288 IPR002110 GO:0005515
Pte2g00582 599 Pfam Cyclic nucleotide-binding domain 187 267 IPR000595 -
Pte2g00582 599 PANTHER POTASSIUM CHANNEL AKT1 1 596 IPR045319 GO:0005249|GO:0006813
Pte2g00582 599 SMART cnmp_10 163 280 IPR000595 -
Pte2g00582 599 SUPERFAMILY Ankyrin repeat 271 485 IPR036770 -
Pte2g00582 599 ProSiteProfiles Ankyrin repeat profile. 436 468 IPR002110 GO:0005515
Pte2g00582 599 CDD CAP_ED 163 276 IPR000595 -
Pte2g00582 599 Gene3D Helix hairpin bin 90 153 - -
Pte2g00582 599 ProSiteProfiles Ankyrin repeat profile. 339 371 IPR002110 GO:0005515
Pte2g00582 599 Pfam Ion channel 30 85 IPR013099 -
Pte2g00582 599 Gene3D - 1 86 - -
Pte2g00582 599 SUPERFAMILY Voltage-gated potassium channels 16 124 - -
Pte2g00582 599 Gene3D - 308 487 IPR036770 -
Pte2g00582 599 ProSiteProfiles KHA domain profile. 523 599 IPR021789 -
Pte2g00582 599 PRINTS Ankyrin repeat signature 419 433 IPR002110 GO:0005515
Pte2g00582 599 PRINTS Ankyrin repeat signature 340 355 IPR002110 GO:0005515
Pte2g00582 599 ProSiteProfiles Ankyrin repeat region circular profile. 339 370 - -
Pte2g00582 599 Pfam KHA, dimerisation domain of potassium ion channel 522 594 IPR021789 -
Pte2g00582 599 FunFam Potassium channel KAT2 151 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00582 Pte-Chr2 4468109 4471476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00582 2 344 Ion Channels AT4G22200 77.168 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00582 K21867 - pvy:116144082 931.784