Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00569 ATGAGACGAAGATTAGAAGAAAATCTTCGCCGTAGGGTGGAGTCCTGCAAGTCTGCGTGCCCAACCATTGATGATATGGTTTCATATCTTCACTCAGAATTTCCTGAATATCGTAGAATGAAGAGGCAAACACTAACCCCTTTAGTCCGACAAGCCATGGAATCGCCTCAAAGTGGCAATAACAAGAGGAATATAAATACACACTCTAGGTCTCATCTCAGGTTTGAGCCTGGGAGTGAAGAAGATGGAGAGATTTTTATCAAAGAAGAAATGGGTAGAAGTCAGGAACGTAAAAGGTTGAAGAAAATGAATGAGAGTGAAGAGAAATTGCAACGTATTGACAATTTACACCTCAGAAGAAAACAGAGTAATGTTTTGAACAACTCCGCATCTTCTTTGTCTGGGTCTGAGTCAGAAGGTGATGATGTTAATGGAGCAGTTTCAACATCAGAGGATGCAGTTTATTGTCAGGAAGTGAAACCAGAGATTGATTTAATGAAGGCAATGTTGAGATCAAAATATAAGAAAGGGGCATCTGAAAAAAGTGTGGAACTGGAGGTGGCTAATGACATTAAGGGTAGTCAGGCTGTATTAGTAGATTTTAATAAAGGTGAGGAAAGGTTGGGATCGGAGATAAAGAGAGAAGCAAAGGGTTCTGTTTCTAATGGAAGTAGTGGTGATGAGATTAAGGGAAAAAATAATGGACCAAGATTTGAAGATTTGGGTGGGATGAAGGATGTGCTGGAGGAATTGAAGATGGAAGTGATAGTGCCCTTGTGTCATCCACAGTTGCCGAGGTGGTTGGGAGTTAGACCAATGGCAGGGATTTTGTTGCATGGTCCACCTGGTTGTGGGAAGACTAAGCTTGCTCATGCAATAGCCAATGAGACGGGTGTTCCATTTTATAACATTTCAGCTACTGAGGTTGTCTCCGGTGTCTCAGGTGCTTCTGAAGAGAATATTAGAGAACTTTTTGCTAAAGCACACAGGACTGCCCCTTCTATTGTTTTTATTGATGAGATTGATGCAATTGCATCGAAAAGAGAGAATTTGCAAAGAGAAATGGAAAAGCGAATTGTGACACAGTTGATGACATGCATGGATGAATCTCATAGAACCCCTCAACTTGATGATGAGAAGCTACATTCTGAAAAGTCAGATAAAAATCTGGGATATGTGCTTGTCATTGGAGCCACAAATAGGCCTGATGCTGTTGATCCTGCTCTCAGAAGGCCAGGACGGTTTGATCGTGAGATTGTTGTTGGTGTTCCAGATGAAAATGCGAGGGCAGAAATTCTTTCTGTGCTGACTCGCAATCTTAGGCTTGATGGTTCAATTGATCTTCTCAAAATAGCAAAGTCAACTGGTGGCTTTGTTGGAGCTGATTTGACAGCTTTGGTCAATAAGGCTGGTAATCTGGCGATGAAGAGGATTATCGATGAAAGAAAGTGCGAGTTGTCTCGAGAATCTAAAATTGATCCCACTGAAGAGTGGTGGAAAAAACCATGGTCACTTGAAGAGATGGATAAGCTCGCCATAAAAATGTCTGATTTTGAGGTTGCTGTCAATTCGGTTCAGCCCTCACTAAGAAGAGAAGGATTCTCTTCCATCCCTACAGTAAAATGGGAAGATGTTGGTGGGCTTGATCATCTGCGGAGGGAATTTGAACGTTATATAGTAAAGCGTATAAAATATTCTGAGTTGTACAAGCAATTTGGGGTTGATCTGGAGACGGGGTTTTTGCTTTATGGTCCTCCAGGATGCGGTAAAACTCTCATTGCAAAAGCCGTTGCCAATGAGGCAGGGGCTAATTTCATTCATGTGAAGGTCAACATTTTGATTCCCTGTCTGCAGTTTAATATTTGCATTTCACCTTTTAAAGTGGAGTTCCATGTGCTCTCTACTTGA 1908 0.4161 MRRRLEENLRRRVESCKSACPTIDDMVSYLHSEFPEYRRMKRQTLTPLVRQAMESPQSGNNKRNINTHSRSHLRFEPGSEEDGEIFIKEEMGRSQERKRLKKMNESEEKLQRIDNLHLRRKQSNVLNNSASSLSGSESEGDDVNGAVSTSEDAVYCQEVKPEIDLMKAMLRSKYKKGASEKSVELEVANDIKGSQAVLVDFNKGEERLGSEIKREAKGSVSNGSSGDEIKGKNNGPRFEDLGGMKDVLEELKMEVIVPLCHPQLPRWLGVRPMAGILLHGPPGCGKTKLAHAIANETGVPFYNISATEVVSGVSGASEENIRELFAKAHRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTCMDESHRTPQLDDEKLHSEKSDKNLGYVLVIGATNRPDAVDPALRRPGRFDREIVVGVPDENARAEILSVLTRNLRLDGSIDLLKIAKSTGGFVGADLTALVNKAGNLAMKRIIDERKCELSRESKIDPTEEWWKKPWSLEEMDKLAIKMSDFEVAVNSVQPSLRREGFSSIPTVKWEDVGGLDHLRREFERYIVKRIKYSELYKQFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHVKVNILIPCLQFNICISPFKVEFHVLST* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00569 635 FunFam Ribosome biogenesis ATPase RIX7 227 422 - -
Pte2g00569 635 Coils Coil 93 113 - -
Pte2g00569 635 MobiDBLite consensus disorder prediction 210 236 - -
Pte2g00569 635 ProSitePatterns AAA-protein family signature. 393 411 IPR003960 GO:0005524|GO:0016887
Pte2g00569 635 Gene3D - 535 615 IPR027417 -
Pte2g00569 635 MobiDBLite consensus disorder prediction 120 145 - -
Pte2g00569 635 Gene3D - 424 532 - -
Pte2g00569 635 PANTHER AAA-FAMILY ATPASE 97 610 - -
Pte2g00569 635 SMART AAA_5 272 425 IPR003593 GO:0016887
Pte2g00569 635 Gene3D - 222 422 IPR027417 -
Pte2g00569 635 FunFam Cell division control protein 48 homolog C 424 532 - -
Pte2g00569 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 237 530 IPR027417 -
Pte2g00569 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 515 609 IPR027417 -
Pte2g00569 635 MobiDBLite consensus disorder prediction 52 78 - -
Pte2g00569 635 Pfam AAA+ lid domain 445 481 IPR041569 -
Pte2g00569 635 MobiDBLite consensus disorder prediction 91 146 - -
Pte2g00569 635 MobiDBLite consensus disorder prediction 91 119 - -
Pte2g00569 635 MobiDBLite consensus disorder prediction 52 66 - -
Pte2g00569 635 Pfam ATPase family associated with various cellular activities (AAA) 276 422 IPR003959 GO:0005524|GO:0016887
Pte2g00569 635 Pfam ATPase family associated with various cellular activities (AAA) 581 611 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00569 Pte-Chr2 4339798 4343360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00569 230 609 Calmodulin-binding Proteins AT3G56690 33.718 9.83e-69 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00569 K14571 - qsa:O6P43_012227 747.658