Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00553 ATGGAAATCTCACTAGGTTCCAGCTTCAGCACCTTTTCACCATTCATGTCTAGTTCTTCAATCTCGTGTAAACCGCTACCATTGAGAGTGTCTGTTTCATGTAGAGCGTCAGCAACTCAAAGCGCATATGGGATTCAACAGATGAACAGTAATTTCTATAATGTTTTGTCACTAAGTCCAAAAAGTGCTACACCTGACGATATTAAAAGGGCTTATAGATCCATGGCTCTCAAGTACCATCCTGATGTGTGTCATCCTTCAATGAAAGAAGAGTCTACCAAGATGTTTGTCCAGCTCAACGAAGCTTACAAGACGCTGTCAAATCCTTCCCTGCGTCAAGAGTATGATGGTGAACTGGGTCTGAAAGACAGCATGGTGAGCGGTTTTAGTTTCAGAGAGGAGCATGAGTTGAGGCTATGGCAAGAAGAGGAGGTAGCTGAGTTGAAGAGAAGGAAAGATTCTCGTATGGAAAGAAAGAAAGGGTCATGTAGCAGTAGAATGAGGAGTAGAAACAAAGGGAGAGATTAA 528 0.4261 MEISLGSSFSTFSPFMSSSSISCKPLPLRVSVSCRASATQSAYGIQQMNSNFYNVLSLSPKSATPDDIKRAYRSMALKYHPDVCHPSMKEESTKMFVQLNEAYKTLSNPSLRQEYDGELGLKDSMVSGFSFREEHELRLWQEEEVAELKRRKDSRMERKKGSCSSRMRSRNKGRD* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00553 175 Gene3D DnaJ domain 37 139 IPR036869 -
Pte2g00553 175 Pfam DnaJ domain 51 116 IPR001623 -
Pte2g00553 175 CDD DnaJ 51 108 IPR001623 -
Pte2g00553 175 PRINTS DnaJ domain signature 72 87 IPR001623 -
Pte2g00553 175 PRINTS DnaJ domain signature 91 111 IPR001623 -
Pte2g00553 175 PRINTS DnaJ domain signature 54 72 IPR001623 -
Pte2g00553 175 SMART dnaj_3 50 111 IPR001623 -
Pte2g00553 175 SUPERFAMILY Chaperone J-domain 10 115 IPR036869 -
Pte2g00553 175 ProSiteProfiles dnaJ domain profile. 51 119 IPR001623 -
Pte2g00553 175 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 29 172 - -
Pte2g00553 175 MobiDBLite consensus disorder prediction 148 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00553 Pte-Chr2 4233076 4234244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00553 53 116 C2H2 Transcription Factor Family AT1G74250 40.299 7.34e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00553 - - aip:107631621 143.28