Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00526 ATGCAAAGCTGTCTTTGCAAGGTTTTTGGAGCTTGCAATGTCTCTAAGCTGCTTATACATATTCCATTTCATAAGAGACTTGATGCAGTGGTTACCATATGTTATGAAGTGCGGGCAAGGCTCAGAGATCCTGTCTATGGCTGTGTTGCTCACATCTTTGCTCTTCGGCAACAAAAATTTGGAATTGAGAGAAGTCAACCCCAAGAGCTGCTTCTTGTTTTGAGAGAAGACAGACATATATGTGAACTGCTGTTTTCTGAAGACCAACGGGGCGACCATGAAATGAAGGAGAGTCTAGCCCAACAATACATCTTGAATTGCTAG 324 0.4259 MQSCLCKVFGACNVSKLLIHIPFHKRLDAVVTICYEVRARLRDPVYGCVAHIFALRQQKFGIERSQPQELLLVLREDRHICELLFSEDQRGDHEMKESLAQQYILNC* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00526 107 PANTHER LOB DOMAIN CONTAINING PROTEIN 6 60 - -
Pte2g00526 107 ProSiteProfiles LOB domain profile. 1 73 IPR004883 -
Pte2g00526 107 Pfam Lateral organ boundaries (LOB) domain 5 59 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00526 Pte-Chr2 4006696 4007307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00526 7 58 AS2 family AT2G45420 80.769 4.37e-26 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte2g00526 LOB 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00526 K21994 - cpap:110819548 101.293