Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00517 ATGATGTTTCCGAGATTAATGCAAACCCATGAAGGGAGAGTTGGTCAAGAGGCTATGCAGGGTGGTTCTAGCCTCAGTAATAGAGGAGACCCTTGTCTTGTTTTGACTTCTGATCCTAAACCTCGTCTTCGGTGGACAGCTGACCTTCACGAACGATTTGTCGACGCTGTTACTCAACTTGGTGGTGCCAGTAAGGCTACACCTAAAGCCATCATGCGAACCATGAATGTGAAGGGGTTGACTCTTTTTCATCTAAAGAGTCATCTTCAGAAATATAGACTTGGTAAGCAATCTGGAAAGGATATCTCTGAAGGATTCCAAGACGGAATGCCAGCCTCCTACCTTCTTGAGAGCCCCAGTACATCGCCGAAGTTAGCAACTTCTGATGTAAATGAGGGTCATGACGTCAAGGAGGCTTTAAGAGCACAGATGGAAGTCCAAAGTAAATTACATTTGCAAGTTGAGGCCGAGAAGCACCTGCAGATTCGCCAGGAGGCAGAGAGAAGATACATGGCCATACTGGACAGAGCTTGTAAGATGCTGGCTGATCAGTTCTTAGGTGCTGCAGTCACTGACACAAACAGCCAAAAGCCTCAGGAACTGGAGAGTAGAACACCGAGAACTCTTTTGCTGGATCAACTTGGGTTCTTTGCGTTACAATCTCCTGAAGTACCAGTAGTGCATGGTCTGGAAGAAGAGCTTGGACGAAACCTGCAGCCTCAAAGGGCTGACTGTTCATCTGAAAGCTGCCTAACATCACATGAAAGTTCTGGAGGGCTGACATTAGCAGGTTCTCCATGTGCAAGGAAGAAAGGAATGGTGAGCTTGGACTCAATTGCTGCTCCTTTTTTATGGGGCGAAGCTATGTTAAGAAGTTATGACATTAACGGAGTGCAAGATGGCCATCAAGGAATTTCTGGATATGGCATGTAG 933 0.4641 MMFPRLMQTHEGRVGQEAMQGGSSLSNRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDISEGFQDGMPASYLLESPSTSPKLATSDVNEGHDVKEALRAQMEVQSKLHLQVEAEKHLQIRQEAERRYMAILDRACKMLADQFLGAAVTDTNSQKPQELESRTPRTLLLDQLGFFALQSPEVPVVHGLEEELGRNLQPQRADCSSESCLTSHESSGGLTLAGSPCARKKGMVSLDSIAAPFLWGEAMLRSYDINGVQDGHQGISGYGM* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00517 310 FunFam Myb family transcription factor 39 97 - -
Pte2g00517 310 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
Pte2g00517 310 Pfam Myb-like DNA-binding domain 43 93 IPR001005 -
Pte2g00517 310 MobiDBLite consensus disorder prediction 1 32 - -
Pte2g00517 310 Gene3D - 39 97 - -
Pte2g00517 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 259 IPR044848 GO:0003700
Pte2g00517 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 97 IPR017930 -
Pte2g00517 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 95 IPR006447 GO:0003677
Pte2g00517 310 SUPERFAMILY Homeodomain-like 40 96 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00517 Pte-Chr2 3968878 3973068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00517 29 253 G2-like Transcription Factor Family AT3G24120 48.305 6.48e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte2g00517 Myb_DNA-binding 7.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00517 - - qsa:O6P43_012080 433.335