Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00493 ATGGACGACCTGTTCGCTAACGCCGACGAACATTTCCCTCCCAACGTGGCGTCATTTCCTGATTCTACAGACTTTCTCTTCGCTAATCCAACGTCTCTAATTCACACGCCTCAGCTTCTCCCTCCGCAAGTATCCAACAACAATAACAACAATAACCTTCCTCCTCAGAAACTTCGTCCCATCAGGGGCAACTATCGTTCTGATGAAGCGGATGGGTTCACCAGAAATGTCGAAGGGTCTGGGAACGTGGGGTCCGCTTTCTTGAGCAGTGAGCTTTGTTCTGTGAATGCTGTTTCTACTGACTACTTCGTAACTCCTGAGAAGCAAAAGGAAGCTGGGGGGGAGGACCGGTTGCAGGTCGAGGTGGAGAGAGACTCTAATGGTGGTGGCGTGGATGCGGATGGCTGTTATCGGGTTCCGGATCCGGTGGGAAACGGGTTGGGTCAGGGTGGTGACACTTGGGACCCGAATGGCCAAGGGTCTTTTTTTAAAGATCACGTCAGCTTCTCTTCAGGAAGTGATTATGACTCGTCAGTCCATACCAAAAAACATGTAAGTGCGAAGAGGAGGAAAAAATCAAGGAAATGCATCGAGAATTTCATGGAAAACTTAACGATGAAGGTGATGGAAAGGCAAGAGGAAATGCACAAGCAATTGATAGAATTGATTGAGAAGAAGGAGAGGGATAGAATTATGAGAGAAGAAGCCTGGCAACAGCAAGAGATAGAAAGAATAAGAAGGGATGAACATGCAAGAGCACAAGAGACATCTCGTAATTTAGCTCTCATAGCATTCATCCAAAACTTGTTGGGGACAGAAATTCAAATCCCACGTCCTGTTGTAAACCAATGCACCGAAGTCAACAGAGCTGAAATGGATATCCACAATGATTTCAGAAGTGATGCAGTTAACAATGGATGTCAGACAGAAGCTGAGTATGGAGTTGAAATTGAGAACCAAAAGAGTGATACAATCAACAACAGATGGCCAGATTCTGAGGTACAAGCCCTCATAACACTAAGAACTACCTTGGAACACAAATTTCATCTCATGGGGTCTAAAGGATCCATATGGGAGGAGATCTCTGCTGCAATGCTGAATATGGGTTACCACCGCAATGCAAAGAAGTGTAAGGAGAAGTGGGAGAACATCAACAAGTACTATAAGAAGACAATTGGGAGTGGTAAAAAGCGCCGTGCCAACAGTAAAGCATGCCCGTACTTTGATGAGTTGGATATCCTGTATAAAAATGGGTTGCTGAGTCCAGGAAATGTGTTCAGCAACGTCAACAATGTGGTCAAGACTGAGAATGATTCAATTCAGTAG 1326 0.4517 MDDLFANADEHFPPNVASFPDSTDFLFANPTSLIHTPQLLPPQVSNNNNNNNLPPQKLRPIRGNYRSDEADGFTRNVEGSGNVGSAFLSSELCSVNAVSTDYFVTPEKQKEAGGEDRLQVEVERDSNGGGVDADGCYRVPDPVGNGLGQGGDTWDPNGQGSFFKDHVSFSSGSDYDSSVHTKKHVSAKRRKKSRKCIENFMENLTMKVMERQEEMHKQLIELIEKKERDRIMREEAWQQQEIERIRRDEHARAQETSRNLALIAFIQNLLGTEIQIPRPVVNQCTEVNRAEMDIHNDFRSDAVNNGCQTEAEYGVEIENQKSDTINNRWPDSEVQALITLRTTLEHKFHLMGSKGSIWEEISAAMLNMGYHRNAKKCKEKWENINKYYKKTIGSGKKRRANSKACPYFDELDILYKNGLLSPGNVFSNVNNVVKTENDSIQ* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00493 441 Gene3D - 329 390 - -
Pte2g00493 441 Pfam Myb/SANT-like DNA-binding domain 327 412 IPR044822 -
Pte2g00493 441 MobiDBLite consensus disorder prediction 37 62 - -
Pte2g00493 441 MobiDBLite consensus disorder prediction 37 57 - -
Pte2g00493 441 CDD GT1 327 391 - -
Pte2g00493 441 ProSiteProfiles Myb-like domain profile. 321 385 IPR001005 -
Pte2g00493 441 Coils Coil 209 229 - -
Pte2g00493 441 PANTHER FI21293P1 165 422 - -
Pte2g00493 441 FunFam Trihelix transcription factor GT-2 329 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00493 Pte-Chr2 3742030 3744648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00493 182 417 Trihelix Transcription Factor Family AT5G47660 44.492 2.40e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte2g00493 Myb_DNA-bind_4 1.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00493 - - qsa:O6P43_012047 399.053