Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00491 ATGTTCACTCCAGACGTTCCAGTGGCTCCACTAGGAAAGCCTGATGAGATGCTCAACCCTAGCCATTCGTGGACACTAGGTGCCTCAGGGTATGATGATATGTGCAGTGAGCATGGAATCCCAATGATGATCACATGGAGCTATGGCGGCAAGGATGTAGCTGTGCAGGGATCATGGGATGGTTGGAAAACAAGAATTCCATTGCAAAGGTCAGGGAAAGACTTTATTATCATGAAGGTACTCCCTTCAGGAGTTTACCAGTACCGATTTATTGTTGATGGGCAGTGGAGGTATGCTCCTGACATTCCCTGGGCACAGGATGATGCCGGCAATACTTGTAATGTGTTGGACTTGCAGGATTATGTACCGGAAGATATTGAAAGTATTTCTGGTTTTGAATCTCCTCAGTCTCCTGATTCGAGTTATAACAACTTGCAACTTGGATCTGAAGATTATGCAAAGGAGCCACCCTTGGTTCCTCCCCACATGCAAATGACACTGCTCAATGTGCCTGCCCCAAATATGGAAATTCCTTTGTCAAGACCTCAACACGTAGTCCTTAATCATCTCTACATGCAGAAAGGGAAGAGCAGTTCCACTGTGATTGCACTTGGTACCACTAATCGCTTCCTTGCCAAATACGTTACTGTGGTCCTGTACAAGTCTTTACAGAGGTAA 678 0.4572 MFTPDVPVAPLGKPDEMLNPSHSWTLGASGYDDMCSEHGIPMMITWSYGGKDVAVQGSWDGWKTRIPLQRSGKDFIIMKVLPSGVYQYRFIVDGQWRYAPDIPWAQDDAGNTCNVLDLQDYVPEDIESISGFESPQSPDSSYNNLQLGSEDYAKEPPLVPPHMQMTLLNVPAPNMEIPLSRPQHVVLNHLYMQKGKSSSTVIALGTTNRFLAKYVTVVLYKSLQR* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00491 225 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 225 IPR043554 -
Pte2g00491 225 Gene3D Immunoglobulins 34 122 IPR013783 -
Pte2g00491 225 CDD E_set_AMPKbeta_like_N 41 117 - -
Pte2g00491 225 SMART AMPKBI_2 135 223 IPR006828 GO:0005515
Pte2g00491 225 Pfam Glycogen recognition site of AMP-activated protein kinase 40 119 IPR032640 -
Pte2g00491 225 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 153 221 IPR006828 GO:0005515
Pte2g00491 225 Gene3D - 128 223 - -
Pte2g00491 225 SUPERFAMILY AMPKBI-like 122 222 IPR037256 -
Pte2g00491 225 SUPERFAMILY E set domains 40 125 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00491 Pte-Chr2 3729298 3732117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00491 13 120 Protein tyrosine phosphatase (PTP) family AT3G01510 30.702 8.32e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00491 K07199 - qsa:O6P43_031379 394.815