Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00446 ATGGCAACCCTGCAGCGTCTAGCCAGATCAGCTCGCCCATGGCTGTTATTTTCTACTTCTAAAACCCCAACCTCTTCAACTTCCTCCTCACGCTACGTTCCTCACCGCCAGTTGCTTCACAGTAATTTGGTTTCCAATGCGTCTCAAGTTCAGTGTTCATGTCCTGCACCTGAAGCTCATAAATCTTATGCTGTATTGGCAAGTATTTTCGGTTTGGGAATGCTTAAAGTTGCTCATGCTGATGCTAACGAGTCACAGGCTGAATCTAAACGTCCCGCTCCAGTAGAATCTCCTTCCATTCATGGTGACCTGGAGGAAATTGCAAGGAAAGAACGAGAGCGAATTAATGACTCACTTCAAAATAAAGGATTAAGATATGGTTCTTATCCTCGTTTCACTGTAGCTGTTAAGGGCCAAAAGGTCACAATTAAGTTCCAAATTCCTCCTGCATGTGAAGTTTCACAACTTATTGCAAACCTTGTTTCGCATCTTGGAGTGAAGGTTGAAGAGAGTGGCGGTGGTTCAGATATGCTTTTACGGGCATGGGACAGCACAGTTGCGTGGCAACTGACACTTACTCGTCCTAGAAAGGAAAAGGATGTCCAAGGGGCTCATAGACAGTTAACTACGGAAGCGCGTGATGGAGACCTATACATTCTCCTCTTCCATTCTCTCATTAGCTCAGATAAAGCTGAAATTGAATTCATAAAGAATGGGAGTTTGAGTCCCCAAGAGCTAGATGCTTTAGTTTCTGTTCTGCAATTAGCTGGCTCAAAAATGGGACAAAAGTCTGCATTGGAGAGAAAATCGAGAGAAGATACTACAAGGGTTCCATCTGTAGATAAATCGATATCTAACCTCGAGTCCATGGGAGTGAGAATTTATGGACTTGACGAGCCCCATATGAATTTTCCAAACTGTGGGATATCATGGGATAATATTGCTGGGTACGACCAACAAAAACGAGAAATAGAAGATACCATACTATTAGCATTGCAAAGTCCTGAAGTATATGATGACATTGCCCGTGGAACTCGGCGGAAGTTTGAGTCTAACAGGCCCAGGGCAGTGCTCTTTGAAGGCCCACCAGGGACAGGAAAGACTTCATGTGCCCGTGTTATTGCTAATCAAGCGGGTGTCCCTTTGCTATACGTGCCTTTGGAAGTCGTCATGTCAAAGTACTATGGTGAAAGTGAACGCTTGTTGGGGAAAGTGTTTTCTCTTGCAAATGAACTTCCAAATGGTGCTATCATTTTCCTGGATGAGGTCGATTCTTTTGCCGTGGCCCGTGATAGTGAAATGCACGAAGCTACACGTAGAGTCTTGTCAGTTTTACTACGACAAATAGATGGTTTTGAGCAGGATAAGAAAGTGGTTGTTATTGCTGCTACAAATAGAAAGCAAGATCTTGATCCTGCGTTGATTAGTCGATTTGATTCAATGATTGCTTTTGGTTTACCTGCTTATAACAATCGTCAAGAAATAGCGGCCCAATATGCAAAGCACCTGAAAAAGGCTGAATTAGAAGAATTTGCGAGAGTCACAGAAGAAATGTCAGGGAGGGACATTAGAGATGTGTGCCAACAAGCTGAACGGTCATGGGCGTCAAAGATAATCCGAGGACAGGCATCTAAAGGAGGAGAAAACGAGCTTCTTCCACCTTTGCAAGAGTACATTGACAGTGCCATCAATCGTCGAAAGGCCTTACTTAGCATTGCTGACCAGAGAACCGAAACTTTTGGTTCACGCAAGAAAGCTCCATTAGATCTTTGTTAA 1776 0.4369 MATLQRLARSARPWLLFSTSKTPTSSTSSSRYVPHRQLLHSNLVSNASQVQCSCPAPEAHKSYAVLASIFGLGMLKVAHADANESQAESKRPAPVESPSIHGDLEEIARKERERINDSLQNKGLRYGSYPRFTVAVKGQKVTIKFQIPPACEVSQLIANLVSHLGVKVEESGGGSDMLLRAWDSTVAWQLTLTRPRKEKDVQGAHRQLTTEARDGDLYILLFHSLISSDKAEIEFIKNGSLSPQELDALVSVLQLAGSKMGQKSALERKSREDTTRVPSVDKSISNLESMGVRIYGLDEPHMNFPNCGISWDNIAGYDQQKREIEDTILLALQSPEVYDDIARGTRRKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEVVMSKYYGESERLLGKVFSLANELPNGAIIFLDEVDSFAVARDSEMHEATRRVLSVLLRQIDGFEQDKKVVVIAATNRKQDLDPALISRFDSMIAFGLPAYNNRQEIAAQYAKHLKKAELEEFARVTEEMSGRDIRDVCQQAERSWASKIIRGQASKGGENELLPPLQEYIDSAINRRKALLSIADQRTETFGSRKKAPLDLC* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00446 591 CDD RecA-like_protease 342 484 - -
Pte2g00446 591 Gene3D - 487 545 - -
Pte2g00446 591 SMART AAA_5 353 488 IPR003593 GO:0016887
Pte2g00446 591 Pfam ATPase family associated with various cellular activities (AAA) 357 485 IPR003959 GO:0005524|GO:0016887
Pte2g00446 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 309 537 IPR027417 -
Pte2g00446 591 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 258 531 - -
Pte2g00446 591 ProSitePatterns AAA-protein family signature. 458 477 IPR003960 GO:0005524|GO:0016887
Pte2g00446 591 Gene3D - 308 486 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00446 Pte-Chr2 3463478 3470277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00446 353 530 Calmodulin-binding Proteins AT3G56690 38.710 1.37e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00446 - - qsa:O6P43_011963 848.58