Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte2g00442 | ATGGCAATAGCCAAAAATTTATACTCTGAGTTTCGGTTAATGGCTGTGATGATCTTTGTGGCCGTGCCTCTGGTCCTTGCAAACACCGACCCTTCTGATGTGGACGCGCTTCTTGCTTTGTACGCTGCACTAAACAGGCCATCTCAGCTAACTGGTTGGAGAAGCAGTGGAGGGGATCCTTGTCGGGAGTTTTGGAGAGGGGTAACATGCGAGGGATCAGCCGTGGTTTCCGTTGATATTTCAGGCTTGGGACTCGGCGGTACCGCGGGAGATCTGCTTTCAAACCTGATGTCTCTGAGAGACCTTGATTTGAGCAACAATAACATCCATGATACAATTCCTTATCAATTACCACCAAATCTCAGTAGCTTGTACTTACAGAACAATCAGTTAACTGGCTCTCTGAGTGTTCTCGTTGACTTACCTTTATATTCTCTAAATGTCGCTAACAATAACTTTATTGGATGGATACCTCACGAGCTAAGCTCAATCCAACACTTTCTATCTGATGGAAATTCATTTGAAAATTGTCCTACTCCTTCTCCTTCGACACCACCTTATACTTCATTACATCCTATTAGTTTTAGAACAAATGGTATCCATATTCGTTTTGGTTCTACCGGTGGGCATGCATCACATAGATCTGGAGGTGAAGACGCTTCTCGGAGGCAAAGGGCTTCAGAAGTCTGGGCTAGTGTGGGTGTTGTTTTGGGCTCACTGGCCGTGGCTCTTGTGGTCTTTGCTCTCTATTTCTGTGTTTGGAAGTGGAAACATTGGGAAGGTGGCACCAGAATTATTATCTCTTCTGGAACAGATAACACTTCTTCTGTGATGCAAGAGCATAGGGTAAAGATTTCTACTGTTAATTCATTTGGGAGGTCTCTTCCAGCAGAAAGATTGATGTCTGAGAGGGTTCATGTGAAGAATGGATCTATGGAAAGAACAAAGTCCACTATGACTGCCACTTCCTATACTGTCGATGATCTCCAGAGTACAACAAAAAGTTTTAGTCAAGAATTTTTCATTGTTGAGGGTTCCCTTGGTCGAGTTTATCAAGCAGAGTTCCCCAATGGGAAGGTCATGGCTATTAAGGAAATTGACAATGCAGCACTGTCTGTACAGGATGAAAATGATTTCCTTGAAGCTGTTTCAAATATATCATCACTGAGACACACAAACATTGTTACATTAGCTGGATTTTGTGCTGAGTATGGGCAACAGTTCCTGGTTTATGAGCACATAGGGAACAGAAATTTACATGATATGCTCCATTGTGTGGACGACAGTTTTAAGGCTCTATCTTGGAATGCTCGCATACAAATTGCTCTTGGCACCGCTCGAGCTTTAGAGTACTTGCATGAAGCGTGCCTTCCTTCCGTTGTACATGGAAACTTGAAATCAGCAACTATTTTACTTGATGAGAAGCTCAATCCTCATTTGTCAGATTGTGGCTTGACAGCATTAACACCACATATTGAGCGGCAGGTTGCAACTCAGATGTTTAGTCCGTTTGGTTATAGTGCTCCTGAGTTTGCTTCGTCAGGTATACACACTGTAAAAACAGATGTTTACAGTTTTGGAGTGGTGATGCTGGAGCTATTGACTGGTAGGAAGCCTCTTGATAGTTCAAGGGATAGTTCTGAAGAAATACTTGTGAGATGGGCTGCTCCCCAGTTGCATGATATAGATGCTTTGACTGAAATGGTTGATGCTGTTCTAAATGGCATGTATACTGCAAAGTTGCTCTCTCGTTTTGCGGACATCATTGCACTCTGTGTTCAGCCTGAACCAGAGTTCAGACCTCCAATGTCTGAAGTTGTGCAAGCTTTAGTGAGGCTAGTGCAAAGAGCGAGTTCTGCTAAGAACTATTCCACCGGTGAATCTAGTTTTGCTTTACAGGACCGCAGATCACGAAGTCATGGACATGCTACAACTTCAATCGCAGGGTCATTTAGAGTTTAA | 1962 | 0.4327 | MAIAKNLYSEFRLMAVMIFVAVPLVLANTDPSDVDALLALYAALNRPSQLTGWRSSGGDPCREFWRGVTCEGSAVVSVDISGLGLGGTAGDLLSNLMSLRDLDLSNNNIHDTIPYQLPPNLSSLYLQNNQLTGSLSVLVDLPLYSLNVANNNFIGWIPHELSSIQHFLSDGNSFENCPTPSPSTPPYTSLHPISFRTNGIHIRFGSTGGHASHRSGGEDASRRQRASEVWASVGVVLGSLAVALVVFALYFCVWKWKHWEGGTRIIISSGTDNTSSVMQEHRVKISTVNSFGRSLPAERLMSERVHVKNGSMERTKSTMTATSYTVDDLQSTTKSFSQEFFIVEGSLGRVYQAEFPNGKVMAIKEIDNAALSVQDENDFLEAVSNISSLRHTNIVTLAGFCAEYGQQFLVYEHIGNRNLHDMLHCVDDSFKALSWNARIQIALGTARALEYLHEACLPSVVHGNLKSATILLDEKLNPHLSDCGLTALTPHIERQVATQMFSPFGYSAPEFASSGIHTVKTDVYSFGVVMLELLTGRKPLDSSRDSSEEILVRWAAPQLHDIDALTEMVDAVLNGMYTAKLLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASSAKNYSTGESSFALQDRRSRSHGHATTSIAGSFRV* | 654 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte2g00442 | 653 | MobiDBLite | consensus disorder prediction | 629 | 653 | - | - | |
| Pte2g00442 | 653 | Pfam | Leucine rich repeat N-terminal domain | 31 | 70 | IPR013210 | - | |
| Pte2g00442 | 653 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 414 | 624 | - | - | |
| Pte2g00442 | 653 | SUPERFAMILY | Protein kinase-like (PK-like) | 315 | 610 | IPR011009 | - | |
| Pte2g00442 | 653 | ProSiteProfiles | Leucine-rich repeat profile. | 98 | 119 | IPR001611 | GO:0005515 | |
| Pte2g00442 | 653 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 19 | 618 | IPR046959 | - | |
| Pte2g00442 | 653 | SUPERFAMILY | L domain-like | 29 | 187 | - | - | |
| Pte2g00442 | 653 | Pfam | Protein tyrosine and serine/threonine kinase | 343 | 610 | IPR001245 | GO:0004672|GO:0006468 | |
| Pte2g00442 | 653 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 301 | 413 | - | - | |
| Pte2g00442 | 653 | ProSiteProfiles | Leucine-rich repeat profile. | 120 | 142 | IPR001611 | GO:0005515 | |
| Pte2g00442 | 653 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 413 | - | - | |
| Pte2g00442 | 653 | Gene3D | Ribonuclease Inhibitor | 31 | 209 | IPR032675 | - | |
| Pte2g00442 | 653 | Gene3D | Transferase(Phosphotransferase) domain 1 | 415 | 637 | - | - | |
| Pte2g00442 | 653 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 30 | 125 | - | - | |
| Pte2g00442 | 653 | ProSiteProfiles | Protein kinase domain profile. | 336 | 613 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte2g00442 | Pte-Chr2 | 3438228 | 3444299 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte2g00442 | 78 | 646 | Strubbelig Receptor Gene Family | AT4G22130 | 56.379 | 0.0 | 601 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_LRR-V | Pte2g00442 | PK_Tyr_Ser-Thr | 2.8e-34 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte2g00442 | - | - | qsa:O6P43_031282 | 633.254 |