Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00439 ATGGACAAAGGTGGCTGGGGTATCACCCTTGTCGATAGCTCTCTGGGATTATATGATCAAACCAAGCAATCTGTCATCCATTCATTTCCAAACCTCAACCAGCAAAGGATGTTCATGGGTTCTACTGAATTCCCTGTCAATCTTAAACAACAGACCTCAACTGCACACTCTGATGACAATAGGGTCCGGGTAGCCGAGGTCGACTTCTTCTCTGATAGGCAGAAGCTCTCTCTGGCTACTACTTCTGATGATGATCGTCATCGTGATGTTGGTACGAACAGTATCACTGTGAAGGAGGAGAGCAATTACCTCGATGATCACCACTCCGATTTAAACGTAAATACGGGGTTGCAGCTTCTTACCGCTAATACTGGAAGTGACCAATCCACGGTTGACGATGGAGGCTCATCAGACACTGAAGATAAGCGAGCAAGAACAGCTGAGGTTAGTGCACTATTAATTACTATCGCTTACATTTTGGAATTAATTGACTTTGGTCGTTTCTTTCTCTTTTTCGTTCATAAATTTATTAGAGCTCATCAAATTATGGTTGTGTCTACAATTCAGCTAGCAAAACTGCACCTAGAACTGCAGCGTATGAATGTGGAAAACCAAGAGCTGAAAAAGATGCTTAGCCAAGTGAGCATGAACTACACTGCGTTACAAATGCAACTAGTGACATTAATGCACCATCAGCGGCAACAGAACCATCCACCATATGAGGCCATTGGAGTCATGGAAGGAAAATCTGAAGAGAAAAAATCACATGGACAAGGAATAGTGCCAAGGCAGTTTTTACCAGATCATGGTCCGAGTGGTACAGCAGCTGATATTGACGAGGCTTCGAATTCTTCATCTGATGAAAGAACTCGTTCAGGTACACCTCGTACCAACCGTAGTACTAATGTCGCGAAAGACAGTAGTACAATAAATGTGGTAACAAGGGAAGACAGCCCAGATTCCGGATCACATGGTTGGGTTCCCAATAAGGTTCAGAAATTGGATGCTTCCAAGACTATTGACCAACCAGCTGCAGCTGAAGCCACCATGAGGAAAGCCCGTGTATCTGTCCGTGCTCGATCAGAAGCTCCCATGATTAGTGATGGATGTCAATGGCGAAAATATGGACAGAAAATGGCAAAAGGAAATCCATGTCCCCGTGCATATTACAGATGCACCATGGCTGTTGGCTGTCCTGTTCGCAAACAAGTTCAAAGGTGTGCGGAGGACAAGACAATTTTAATCACCACTTACGAAGGGAACCACAATCACCCACTGCCGCCTGCTGCGGTGGCCATGGCGTCAACCACAACGGCGGCTGCTAACATGTTATTGTCAGGGTCAATGTCCAGTGCTGATGGGTTGATGACGAACCCGAATTTGCTAGCAAGGGCTGTTATTCCTTGCTCGTCAAGTATGGCGACAATTTCAGCTTCTGCACCATTCCCCACTGTGACATTAGACCTCACTCACAACTCAAACAATCAATTGCAACTGCAACGACCTGCAGGCCCATTTGCTGTACCCTTCATGGCTCAACCTCAGGGCTACGTATCAGGAGCAGCCGCAAATGCTTTGCCTCAGGCCATTGGGCAAGCGCTCTACAACCAATCTAAGTTTTCTGGGCTTCAACTTTCTCAAGAGATAGGTTCATCCCAAGCAGTTCAACAACTTCCACAACTATCGTTTCTTCAAAACCAGCAGCCGTCAAACGAAACATGGACTGCTGCAACTGCAGCTCTTGCTTCTGATCCAAACTTCACTGCCGCACTTGCAGCTGCCATCTCTTCTATCATAGGTGGTGCTCATCCAAACAATATTAGCAATACCGGTGACAACAGCGGTAACAACCTCCAGCAGAAACAATAA 1869 0.4596 MDKGGWGITLVDSSLGLYDQTKQSVIHSFPNLNQQRMFMGSTEFPVNLKQQTSTAHSDDNRVRVAEVDFFSDRQKLSLATTSDDDRHRDVGTNSITVKEESNYLDDHHSDLNVNTGLQLLTANTGSDQSTVDDGGSSDTEDKRARTAEVSALLITIAYILELIDFGRFFLFFVHKFIRAHQIMVVSTIQLAKLHLELQRMNVENQELKKMLSQVSMNYTALQMQLVTLMHHQRQQNHPPYEAIGVMEGKSEEKKSHGQGIVPRQFLPDHGPSGTAADIDEASNSSSDERTRSGTPRTNRSTNVAKDSSTINVVTREDSPDSGSHGWVPNKVQKLDASKTIDQPAAAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAVAMASTTTAAANMLLSGSMSSADGLMTNPNLLARAVIPCSSSMATISASAPFPTVTLDLTHNSNNQLQLQRPAGPFAVPFMAQPQGYVSGAAANALPQAIGQALYNQSKFSGLQLSQEIGSSQAVQQLPQLSFLQNQQPSNETWTAATAALASDPNFTAALAAAISSIIGGAHPNNISNTGDNSGNNLQQKQ* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00439 622 Gene3D WRKY domain 351 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte2g00439 622 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 189 606 IPR044810 GO:0003700
Pte2g00439 622 MobiDBLite consensus disorder prediction 249 309 - -
Pte2g00439 622 SUPERFAMILY WRKY DNA-binding domain 359 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte2g00439 622 Coils Coil 190 217 - -
Pte2g00439 622 MobiDBLite consensus disorder prediction 277 309 - -
Pte2g00439 622 FunFam probable WRKY transcription factor 31 351 428 - -
Pte2g00439 622 SMART WRKY_cls 366 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g00439 622 Pfam WRKY DNA -binding domain 368 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte2g00439 622 ProSiteProfiles WRKY domain profile. 361 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00439 Pte-Chr2 3408636 3411450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00439 1 620 WRKY Transcription Factor Family AT1G62300 46.979 3.56e-148 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte2g00439 WRKY 4.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00439 - - qsa:O6P43_031267 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01296 9 34384053 34386670 Pte2g00439 2 3408636 3411450 RCT
Pte2g00439 2 3408636 3411450 Pte2g00439 2 3408636 3411450 RCT
Pte17g01023 17 25306366 25308031 Pte2g00439 2 3408636 3411450 RCT
Pte15g00974 15 7178481 7181496 Pte2g00439 2 3408636 3411450 RCT
Pte17g00574 17 8493016 8493836 Pte2g00439 2 3408636 3411450 RCT
Pte2g00439 2 3408636 3411450 Pte9g01296 9 34384053 34386670 RCT