Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00437 ATGGACTGGACCAGGGGTCCGACTATTGGCCGGGGCGCTACTGCCACTGTCTACATTGCTAAGGCTAAAAGGTCCGGTGAATTATTCGCTGTGAAGTCAGCTGAGCTTTCAAAATCCGAATTTATCAAAAGGGAACAGAGAATTCTGTCAACTTTGAAGACGTGCCCTCAAATTGTGGCATACAAAGGTTGTGACATTACATTAGAGAATGGTACCTTGTTGTACAACGTTTTCATGGAGCATGCAGCTCATGGTACGGTGGTGGATGTCATTCACAAGCACAACGGTGGGTTAGCTGACTCTATGGTAAGAGCAATGACTCGCCAGATATTGCTTGGACTTCACCACCTCCATTCAAATGGCATAGTGCATTGTGATATCAAGGGCCAAAATATTTTGGTCGCTGATGAAGGTATCAAGATTGCTGACTTGGGCTGTGCTAAAGTGGTTGATGACATGTCAAGTTCCGCGTGGGTTATTGCTGGTACGCCGGCGTTTATGGCGCCTGAGGTGGCGCGTGGAGAGCAACAGGGACTTTCTGCTGACGTGTGGGCGCTGGGTTGTACAGTCATAGAGATGGTCACAGGCCGGGCTCCATGGACCGATATCGTTGACCCGTTATCAGCACTGTATCGGATTGGGTACTCAGGAGAGGTGCCGGAGATACCAAGTTTTATGTCAAAGCACGGTCGTGATTTCTTGAGTAGGTGCTTTGCTACTGACCCAAATGATCGGTGGTCAACGTGTCAGCTCCTTAAACATGAATTTGTTGAGATTTCCGATTGGGTCTTGAAGGAAATCGGATTTTCTAATTCGGATACGCCAACCAGTGTATTAGACCGTGCCATTTGGGACTCGTCGTCTGAGTTAGAAACATCACTGGATCCGACCCACTATGCCAATTTGAATTCTCCATTGAGCAGAATCCGGAGTTTGTGTTTGTGCCAAGAAGCAACGACGTGGTCTCTGAGTGAAGACAATTGGGAATGTAGCGACTATTGGGTCACTGTAAGAAGCAACGAGATGAAAGATTCAGAGCTCCAGTTAAGCGAGGATATCAACACAGCTACTGTAGACAATTGTGACGGTGAAAATTCCAATTTGGTAAGTGAGGACGACGATTCTATCGTATTAGATGAAGCTACAAACCCGAATCCAAGTCACATTCAGCTGTTCGATGGTGTGAACCACAGCATGAACAGCACCAGCAGCAGCACCTATGGCATTAGGCATAATTATGCTAATCATAGAGATTTATTATTAGTATGCACACCATGTAGAAAGGACATCATTGTACCAATTGCAACACTTGATTTTGAATGCAAGAAAATTGTTTTCAACAATGATCTAGATCGTTCGTCTCTTTCTATTCCAATCATTTGCTTGTTTATCAATACTCAAAATTCAGCCATTGAATCATATTAG 1425 0.4491 MDWTRGPTIGRGATATVYIAKAKRSGELFAVKSAELSKSEFIKREQRILSTLKTCPQIVAYKGCDITLENGTLLYNVFMEHAAHGTVVDVIHKHNGGLADSMVRAMTRQILLGLHHLHSNGIVHCDIKGQNILVADEGIKIADLGCAKVVDDMSSSAWVIAGTPAFMAPEVARGEQQGLSADVWALGCTVIEMVTGRAPWTDIVDPLSALYRIGYSGEVPEIPSFMSKHGRDFLSRCFATDPNDRWSTCQLLKHEFVEISDWVLKEIGFSNSDTPTSVLDRAIWDSSSELETSLDPTHYANLNSPLSRIRSLCLCQEATTWSLSEDNWECSDYWVTVRSNEMKDSELQLSEDINTATVDNCDGENSNLVSEDDDSIVLDEATNPNPSHIQLFDGVNHSMNSTSSSTYGIRHNYANHRDLLLVCTPCRKDIIVPIATLDFECKKIVFNNDLDRSSLSIPIICLFINTQNSAIESY* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00437 474 SMART serkin_6 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00437 474 CDD STKc_MAPKKK 2 257 - -
Pte2g00437 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Pte2g00437 474 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Pte2g00437 474 Pfam Protein kinase domain 6 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00437 474 ProSiteProfiles Protein kinase domain profile. 3 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00437 474 SUPERFAMILY Protein kinase-like (PK-like) 3 297 IPR011009 -
Pte2g00437 474 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 350 - -
Pte2g00437 474 Gene3D Transferase(Phosphotransferase) domain 1 2 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00437 Pte-Chr2 3397240 3398751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00437 2 393 MAP Kinase Kinase Kinase AT5G55090 41.787 5.58e-98 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte2g00437 Pkinase 3.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00437 K20716 - qsa:O6P43_031265 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01130 9 33046537 33047334 Pte2g00437 2 3397240 3398751 RCT
Pte17g00573 17 8440176 8441411 Pte2g00437 2 3397240 3398751 RCT
Pte15g00973 15 7174233 7175850 Pte2g00437 2 3397240 3398751 RCT
Pte1g01567 1 37285144 37286989 Pte2g00437 2 3397240 3398751 RCT
Pte2g00437 2 3397240 3398751 Pte2g00437 2 3397240 3398751 RCT