Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00418 ATGGCTACACACAATCAGCCTCTGCTGACTGCTCCCAACAGCTCTACTTCTCATGCCAAAACTATCTGTCTAGTTCTCTCTGTTGTAGCCCTTGTAAGCTCAACTGCTCTAATTGTCTCCAACCTGACTAAACAGACATCTCCCCATGTCTTCGTTTCTCACCAAATGTGTCAACATGCTCATGAACCAGCTTCATGCATGGCTCTTATATCAGAATTAGTCCAAGACTCAGCTCTGCGGTCCAAATATCATGCCATTTTACTTCATGCATTTCTTGAGAAAACTGCAACTCACATACAAAATGCCAAATTGGCAACCAATGCTGTCAAGTATAGGATCAATGATCCAACACAGCAAGTGGCTTTGGCTGACTGTGAGGAGCTTCTGAGTTTGTCAGCGGACAGAGTTTTGAACTCTATTGCAGCTCTTCAAAATGCGAGCATGGAGTCCCATGAAGACGCACATGCATGGTTGAGTGCTGTACTCACCAACCATGCTACTTGTTTGGATGGACTTGAAGGGTCAGCACTGTTATTGATGGAGGCTCGTCTTAAGGACCTGATATCAAGAGCAAGAACATCCCTCGCCATGTTCGTGGCAATCTCACCTCCAAAATTCGAACACATAGAATCATTAAAAGGAGAGTTGCCATCTTGGTTGTCTAGAGAGGACAGGAAGCTTTTACAGTTGCCAGCTAAGGATATCAAGGCCAATCTTATAGTGGCTCAGGATGGGACTGGAAAGTTCAGGACTGTCAAGGAGGCAGTAGACTCTGCTCCAATTAACAGTAACACAAGATTCGTAATCTACATAAAGAAGGGGACATATAAGGAGAATGTTCAAATTGGTAAGACCAAGAAGAACTTGATGATCGTGGGTGATGGCATGGGTTCAACAGTCATCACCGGCAGCTTGAATGTCGTCGATGGTGCTACAACTTTCCAATCTGCCACCGTTGCTGCTGTTGGAGATGGATTCATAGCTCAAGACATTTGGTTCCAAAACACAGCAGGGCCACAGAAGCACCAAGCTGTGGCGCTTCGTGTTGGTGCTGACCAATCTGTCATCAACCGCTGCAAGATAGATGCCTATCAAGACACTCTGTACGCTCATTCCCTTAGGCAATTCTACCGTGATTCCTTCATCACTGGCACCGTTGATTTCATCTTTGGAAATGCTGCAGTGGTGTTCCAGAACTGCAACCTTGAGGCAAGAAAGCCCTTGAGTAATCAAAACAACATGGTGACAGCCCAAGGTCGTGAAGACCCAAACCAAAACACAGGGACCTCCATCCAAAATTGTAATATCCAAGCCAGCTCAGATCTTCAGCCCGTGAAAGGTTCAATTAAAACTTACTTGGGTCGTCCATGGAAACAGTACTCTAGGACAATGGTGATGCAATCCTTCATTGGTGACCACGTTGATCCAAGTGGATGGTCACCTTGGGATGGAGATTTTGCACTAAAAACACTGTATTATGCTGAGTACATGAACCGTGGTCCAGGTGCTGGAACTAGTAAGAGAGTCAACTGGCCTGGTTACCATGTCGTTACCAACCCTCAAGAAGCCCAGAAGTTCACAGTAGCGCAGCTCATTCAAGGAGGGGTGTGGTTGAAATCGACTGGGGTTGCCTTTACAGAGGGACTGTAA 1650 0.4594 MATHNQPLLTAPNSSTSHAKTICLVLSVVALVSSTALIVSNLTKQTSPHVFVSHQMCQHAHEPASCMALISELVQDSALRSKYHAILLHAFLEKTATHIQNAKLATNAVKYRINDPTQQVALADCEELLSLSADRVLNSIAALQNASMESHEDAHAWLSAVLTNHATCLDGLEGSALLLMEARLKDLISRARTSLAMFVAISPPKFEHIESLKGELPSWLSREDRKLLQLPAKDIKANLIVAQDGTGKFRTVKEAVDSAPINSNTRFVIYIKKGTYKENVQIGKTKKNLMIVGDGMGSTVITGSLNVVDGATTFQSATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADQSVINRCKIDAYQDTLYAHSLRQFYRDSFITGTVDFIFGNAAVVFQNCNLEARKPLSNQNNMVTAQGREDPNQNTGTSIQNCNIQASSDLQPVKGSIKTYLGRPWKQYSRTMVMQSFIGDHVDPSGWSPWDGDFALKTLYYAEYMNRGPGAGTSKRVNWPGYHVVTNPQEAQKFTVAQLIQGGVWLKSTGVAFTEGL* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00418 549 FunFam Pectinesterase 232 549 - -
Pte2g00418 549 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 202 IPR035513 -
Pte2g00418 549 ProSitePatterns Pectinesterase signature 2. 382 391 IPR033131 -
Pte2g00418 549 SMART PMEI_2 48 197 IPR006501 GO:0004857
Pte2g00418 549 Pfam Plant invertase/pectin methylesterase inhibitor 54 181 IPR006501 GO:0004857
Pte2g00418 549 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 193 IPR035513 -
Pte2g00418 549 PANTHER PECTINESTERASE 31 539 - -
Pte2g00418 549 Gene3D - 232 549 IPR012334 -
Pte2g00418 549 NCBIfam pectinesterase inhibitor domain 25 177 IPR006501 GO:0004857
Pte2g00418 549 Pfam Pectinesterase 238 534 IPR000070 GO:0030599|GO:0042545
Pte2g00418 549 ProSitePatterns Pectinesterase signature 1. 263 282 IPR018040 -
Pte2g00418 549 CDD PMEI-like_4 64 202 - -
Pte2g00418 549 SUPERFAMILY Pectin lyase-like 236 548 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00418 Pte-Chr2 3224249 3226606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00418 1 550 Carbohydrate Esterase AT1G11580 57.117 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00418 K01051 - qsa:O6P43_031215 758.444