Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00416 ATGTCTGAACTCGATGTCCAAATTCCCAGTGCCTTTGATCCATTCGCTGATGCAACTGCGGGGGATGCCAGTGCTGGATCAAAGGAATATGTTCACATACGTATACAACAGCGAAATGGTAGGAAAAGCCTGACAACCGTGCAGGGTTTGAAGAAGGAGTTCAGCTACTCCAAAATACTCAAGGACCTTAAGAAAGAGTTCTGCTGCAATGGTACCGTAGTCCAGGATCCTGAATTGGGGCAGGTCATTCAGCTTCAAGGGGATCAGCGAAAGAATGTGTCCACCTTCCTTGTTCAGGCTGGCATCGCAAAGAAGGAACATATCAAGATTCATGGCTTTTAG 342 0.4678 MSELDVQIPSAFDPFADATAGDASAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIAKKEHIKIHGF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00416 113 Gene3D - 1 113 - -
Pte2g00416 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Pte2g00416 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Pte2g00416 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
Pte2g00416 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Pte2g00416 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Pte2g00416 113 NCBIfam translation initiation factor SUI1 5 113 IPR005874 GO:0003743
Pte2g00416 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Pte2g00416 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 6 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00416 Pte-Chr2 3211788 3212594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00416 1 114 Eukaryotic Initiation Factors Gene Family AT4G27130 85.965 3.23e-72 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00416 K03113 - csin:114275037 205.682