Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00414 ATGATGCCTCCCTTGTTTGTTTGTCTTCAACTCCTGCTTTACTGTGTACTTCCATTACTATCCAATCTTGTCTTTGCTGACCCTCCTTATACAAATTGTGCAAACACCACAAACAACAATGCAAGTACTGGTTTTTTCCCTGATAATCTCAACACTCTTCTCGGTTCTCTAGCCACAAATGCTTCCGCCTCCATGTACTATTATGCCACCACTGGTAATTTTCCAGACAGGGTCTTCGGCAACTACATGTGCCTCAACTATGTTACAAACAAAACATGCCAGGATTGCATAGCCACTGCTGTGCAAAGCATTGTCAAACTGTGTCCAAACACAAAGGAAGCAATTGTCTGGGAGGAAGAATGCCAGTTGCGCTTTTCAGATAATGAATTCTTTGGAAAATTAGATGTCACAGGATCCGTTGTAAAAGATAACGTACAGAACATCTCACAGCCAGAACAATTTAATGCTGGGTTGGTCAAGATTCTGAAGAAACTTACTCACCAAGCATCATTCAATATCTCATTAAACAATTATGCTACTGGGGAGGTCAAGCATGATGGTAGGACAATATATGCTTTAGTGCAATGCACTCCAGATTTATCAAAAAATGACTGCAATAGATGCCTTCAAAGTGCGATAAATGACACATTAACTCAGTGCTATTCGTCTATCGGTGCTAGACTTCTTAGTCGTAGTTGTTATCTGAGGTATGAGTTATACCATTTTTATCAAGGAGAATCTGGACTTCCTGGTTCTTCAGCTGTTAATAGTAATAGTACAGGTAGTAGAAGGAAAATTTGGATGATTGTAATCCTAGTGGTTTCATCAAGCTTGGCTATTGTCCTTTTAAGTTGGTTCATATATTATTTCTTGAAGAAGAACGAAATTCAGAAAAGTCTGACGATAACTGTAAGCCCACTAAGTAATAACTTCAGTAGTCACGGTGGCTCGAAGTTCCATTTTCAAATGTCTAGTGGAAGATATGAAATGGGAGCAGATGAATTCCCTTACATTGATTTGCCATCTTTATGTGAGGCAACTGAAAACTTTTCTGATTCAAAACTGCTCGGTCAGGGTGGCTTTGGACTAGTTTATAAGGGAATATTAAGTGATGGAAAGGAAGTGGCTATCAAGAGGCTTTCAACTTGTTCTGATCAGGGTTCTGAAGAGTTTATCAATGAGGTTCTTCTGATAAAGAAACTTCAGCACAAAAATCTTGTGAGGCTGCTAGGCTTTTGTGTAGATGGAGAAGAAAAGCTTCTTGTTTATGAATTCATGCCTAACAGCAGCCTGGACTATCCAGCAAAACGAGCAGAACTCGATTGGAGTAGACGTGTGGAAATAATAAGTGGAATAGCAAAGGGAATTTTGTATCTTAATGAGGATTCAAGACTTAAAATAATACATAGGGATCTAAAAGCAAGTAACATTTTGTTGGACAATGATATGAACCCAAAGATATCAGATTTTGGAATGGCAAGAATATTTGCAGGAAGTGAAGGAGAAGCGAACACAGTCACCATAGTTGGCACATATGGATACATGGCTCCGGAATATGCCATGGAGGGACTATATTCCATTAAGTCTGATGTTTTTAGTTTTGGAGTGCTATTCTTAGAGATCATCACTGGGAAGAGAAATGCAGGGTTTTATCACTCAAAACAAGCACCTAGTCTTCTTGCTTATGCATGGCAATTATGGACCGAAGGAAATGGATTGGAGCTGATGGATCCTTTGTTATCTGATTCGTGCAATCCAGACGAATTCCTGAAGTACATGAACATTGGATTATTATGTGTCCAAGATGACGCACGTGATAGGCCAACCATCCTATTTGAAAACAACCTTAAGCAACTTCTTGAATCTTTGTCTTCCAACACTTTGTCTGGCACCTATGACACCTCAATCGGGAAAAAGCAGGAGGAAGTATATGGTCAAGCGATGTGTAGAGGGGATGTCACCAACTCAACAGTTTGTCAGAATTGCATAAAGAATGCAAGTCAGGATATATTGAGCAAGTGTATGAGTCAAGAAGCGATGATATGGTACAATCTTTGTCAAATTCGGTACTCCTTTCACACTTTCACCTCAATAATGACTTATACTGGCAAGTTTCCAAATGATAATGGTGAAGAGAAGGAGGTTCCACAAAATCCAGCACACTTTGCTCTAGTGCTGGAGTTTCTAATGAAGAACATTTCCAAGGAGGCAGCATATGATGTTTCTGAGAAAATGTTTGCAACTGGGGAGATCAAATATTCTTTGAAGAATACCATCTATGGACTAGTACAATGTACAAGGGACATCTCCCCAAGCAAATGTGACAACTGTTTAGGTTCTGCAACAGCGGATCTTATGGCATGCTGCTCTTCTCGAGAAGGTGGAATGGTTCTTAGCCGGAATTGTAATGTCAGGTTCTCATCATCCCGATTCTTCAACAACTCAATTTACTCACTGACGTATCCAGAATCTCATGAAAGCCATAGCATACTAATTCGAGATTTGACCCCCAAAGGAATAGTCATAAGTACAGAGGAAGTGCTCTTCATGAAACTAGAAATTATAAAGGAAGCCACCAATTACTTTTCAGATACAAACAAGCTAGGGCAAGGAGGCTTTGGTACAGTCTACAAGGGTGTTTTAGAAGATGGGAGTGATGTTGCTGTGAAAAGGTTATCAAGAAATTCATGCCAAGGTTTGGAGGATTTGAAGAATGAGGCCATGCTAATTGCAAAACTACAGCACAAGAATCTAGTAAGACTCTTAGGTTGTGTGGTAGAGGAAGAGGAGACTATGCTCTTATATGAGTTCATGCCCAATGGAAGCCTTGATAAACTTATTTTTGGTGTGCGCTCGCAGCTTGATTGGAATACTTTCTACGACATTATTATAGATATTGCAAGAGGACTACTCTATCTTCATGAGGATTCACGGCTCAAAATCATTCACAGGGATCTAAAGCCTAGTAATGTGTTGCTAGACCAAGAAATGGTTGCCAAAATCTCAGACTTTGGCATGGCCAGAATTTTTTGTGAAGATCAGAAAGCAGCTAAAACTAAGAGAGTAGTTGGAACTTTGGGTTACATGTCTCCCGAATACGCAATGCATGGACTATTCTCTTTTCAATCCGATGTTTTTGCATTTGGGGTCATTTTGCTTGAGATCCTTAGTGGTGAAAGAAACTCTGGCTTCTACCAAACAGGACTTGATCAAACACTTCTTGCTTATGCATGGAGATTGTGGAGTGAAGGAAAGGAGCTAGAATTTGTTGAACCTTCATTGATGAAATCCGATGTGGCTTCTTCCCAAGCTATCAGATGCATGCACATTGGACTGTTGTGCGTGCAAGTAGACCCACAAGACAGACCTGACATGTCAAGCATAGTGTTTCTCCTTGGAAAAGAATCAATGGAACTTCCTAAACCAAAACAACCTCCACTGTCAATGAGAGGGCTGGCTGCACTAGCTGATTCCTCTACAACAGGTCGTAAAGCACCTAACCTTGGGTTTTCCGATATATCAGCACGATGA 3531 0.4016 MMPPLFVCLQLLLYCVLPLLSNLVFADPPYTNCANTTNNNASTGFFPDNLNTLLGSLATNASASMYYYATTGNFPDRVFGNYMCLNYVTNKTCQDCIATAVQSIVKLCPNTKEAIVWEEECQLRFSDNEFFGKLDVTGSVVKDNVQNISQPEQFNAGLVKILKKLTHQASFNISLNNYATGEVKHDGRTIYALVQCTPDLSKNDCNRCLQSAINDTLTQCYSSIGARLLSRSCYLRYELYHFYQGESGLPGSSAVNSNSTGSRRKIWMIVILVVSSSLAIVLLSWFIYYFLKKNEIQKSLTITVSPLSNNFSSHGGSKFHFQMSSGRYEMGADEFPYIDLPSLCEATENFSDSKLLGQGGFGLVYKGILSDGKEVAIKRLSTCSDQGSEEFINEVLLIKKLQHKNLVRLLGFCVDGEEKLLVYEFMPNSSLDYPAKRAELDWSRRVEIISGIAKGILYLNEDSRLKIIHRDLKASNILLDNDMNPKISDFGMARIFAGSEGEANTVTIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLFLEIITGKRNAGFYHSKQAPSLLAYAWQLWTEGNGLELMDPLLSDSCNPDEFLKYMNIGLLCVQDDARDRPTILFENNLKQLLESLSSNTLSGTYDTSIGKKQEEVYGQAMCRGDVTNSTVCQNCIKNASQDILSKCMSQEAMIWYNLCQIRYSFHTFTSIMTYTGKFPNDNGEEKEVPQNPAHFALVLEFLMKNISKEAAYDVSEKMFATGEIKYSLKNTIYGLVQCTRDISPSKCDNCLGSATADLMACCSSREGGMVLSRNCNVRFSSSRFFNNSIYSLTYPESHESHSILIRDLTPKGIVISTEEVLFMKLEIIKEATNYFSDTNKLGQGGFGTVYKGVLEDGSDVAVKRLSRNSCQGLEDLKNEAMLIAKLQHKNLVRLLGCVVEEEETMLLYEFMPNGSLDKLIFGVRSQLDWNTFYDIIIDIARGLLYLHEDSRLKIIHRDLKPSNVLLDQEMVAKISDFGMARIFCEDQKAAKTKRVVGTLGYMSPEYAMHGLFSFQSDVFAFGVILLEILSGERNSGFYQTGLDQTLLAYAWRLWSEGKELEFVEPSLMKSDVASSQAIRCMHIGLLCVQVDPQDRPDMSSIVFLLGKESMELPKPKQPPLSMRGLAALADSSTTGRKAPNLGFSDISAR* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00414 1176 ProSiteProfiles Gnk2-homologous domain profile. 136 242 IPR002902 -
Pte2g00414 1176 Pfam Protein tyrosine and serine/threonine kinase 865 1129 IPR001245 GO:0004672|GO:0006468
Pte2g00414 1176 Pfam Protein tyrosine and serine/threonine kinase 354 547 IPR001245 GO:0004672|GO:0006468
Pte2g00414 1176 ProSiteProfiles Gnk2-homologous domain profile. 594 695 IPR002902 -
Pte2g00414 1176 Gene3D Transferase(Phosphotransferase) domain 1 938 1141 - -
Pte2g00414 1176 Gene3D Transferase(Phosphotransferase) domain 1 426 637 - -
Pte2g00414 1176 FunFam Liguleless narrow1 426 626 - -
Pte2g00414 1176 ProSiteProfiles Protein kinase domain profile. 350 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00414 1176 FunFam Os08g0179000 protein 325 425 - -
Pte2g00414 1176 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 825 937 - -
Pte2g00414 1176 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Pte2g00414 1176 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Pte2g00414 1176 Pfam Salt stress response/antifungal 718 808 IPR002902 -
Pte2g00414 1176 Pfam Salt stress response/antifungal 146 240 IPR002902 -
Pte2g00414 1176 Pfam Salt stress response/antifungal 607 691 IPR002902 -
Pte2g00414 1176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Pte2g00414 1176 MobiDBLite consensus disorder prediction 1139 1176 - -
Pte2g00414 1176 Gene3D - 29 130 IPR038408 -
Pte2g00414 1176 Gene3D - 139 242 IPR038408 -
Pte2g00414 1176 Gene3D - 707 811 IPR038408 -
Pte2g00414 1176 SMART serkin_6 862 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00414 1176 SMART serkin_6 350 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00414 1176 FunFam Cysteine-rich receptor-like protein kinase 10 707 811 - -
Pte2g00414 1176 Gene3D Phosphorylase Kinase; domain 1 317 425 - -
Pte2g00414 1176 Gene3D Phosphorylase Kinase; domain 1 828 937 - -
Pte2g00414 1176 FunFam Cysteine-rich receptor-like protein kinase 10 139 242 - -
Pte2g00414 1176 ProSitePatterns Protein kinases ATP-binding region signature. 868 890 IPR017441 GO:0005524
Pte2g00414 1176 FunFam Uncharacterized protein 938 1138 - -
Pte2g00414 1176 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Pte2g00414 1176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 981 993 IPR008271 GO:0004672|GO:0006468
Pte2g00414 1176 CDD STKc_IRAK 356 610 - -
Pte2g00414 1176 CDD STKc_IRAK 868 1134 - -
Pte2g00414 1176 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 616 1149 - -
Pte2g00414 1176 SUPERFAMILY Protein kinase-like (PK-like) 332 610 IPR011009 -
Pte2g00414 1176 ProSiteProfiles Gnk2-homologous domain profile. 704 811 IPR002902 -
Pte2g00414 1176 SUPERFAMILY Protein kinase-like (PK-like) 844 1131 IPR011009 -
Pte2g00414 1176 ProSiteProfiles Protein kinase domain profile. 862 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00414 Pte-Chr2 3194188 3200848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00414 12 610 Receptor kinase-like Gene Family AT4G05200 42.215 1.92e-149 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte2g00414 PK_Tyr_Ser-Thr 4.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00414 - - pcin:129293128 721.079