Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00409 ATGAGCGAGAAAGCTATCTACTCCACCACCTTTGTCTGTCACCCATCCATCCATCCACACGTTGGTACTGCCTTTCCCACCTCGGCAACAACAGAGTGGCACCCGAGCGGTAGGAAAAGTGCCCTTACTTCCATCAAAGGTATCGGTAGGAGATTTACCAATATTTTCTGCAAGAAAGCCGATATCGACATGAACAAAAGAGCAGGAGAGCTTACTGCTGCTGAGCTCGACAATCTCATGGATTACAAGGATGGGAAGTTCTCACAGGTGGTTTCAAATGCATTGGATATGAAGTTGAGAGATGATTTGGAGAGACTGAAGAAAATCAGGAACCATCGTGGTCTGAGGCATTACTGGGGCCTCCGTGTCCGTGGGCAACACACTAAGACCACTGGCCGTAGGGGCAAGATTGTTGGTGTCTCCAAGAAGCGTTGA 435 0.4874 MSEKAIYSTTFVCHPSIHPHVGTAFPTSATTEWHPSGRKSALTSIKGIGRRFTNIFCKKADIDMNKRAGELTAAELDNLMDYKDGKFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKIVGVSKKR* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00409 144 ProSiteProfiles Ribosomal protein S13 family profile. 41 136 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pte2g00409 144 FunFam 40S ribosomal protein S18 84 135 - -
Pte2g00409 144 SUPERFAMILY S13-like H2TH domain 39 144 IPR010979 GO:0003676
Pte2g00409 144 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 40 144 - -
Pte2g00409 144 Pfam Ribosomal protein S13/S18 40 134 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pte2g00409 144 Gene3D - 36 87 - -
Pte2g00409 144 ProSitePatterns Ribosomal protein S13 signature. 113 126 IPR018269 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pte2g00409 144 Gene3D 30s ribosomal protein s13, domain 2 88 134 IPR027437 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00409 Pte-Chr2 3139438 3140249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00409 41 145 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 77.600 2.03e-63 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00409 K02964 - csv:101221450 191.815