Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00307 ATGGCTTCTAATCAATCTGATTCAGAATCAACAGAGCAATCACCACCACCCCCTTCAGATTCTTCATCATCATCACTGCCACCTCCCCCATTAGATGTATCATCATCTCCACCACCACCTTCTGATAGTCAATCATCCCCACCACCACCTTCAGATAATCAATCATCCTCGCCACCACCATCAGATGATCAATCATCTCCACCACCGCCTAATATGCAAGACAAGACATCTCTAAGAGAACAGATTGCAACAATTGGTGGATCAGTTGCCGATCTTCAGAGATTCTGCAATCATACTAATTACACTATATGGCCCAAGATCTTTGAAATGGCATCAAATAATGACTACTACAGTAGAGCTACTTCCCCAAATATGCACGGACAACCTGGTGACCATTTTGTAAATATACCACCACCTCCCGGTGCAACAAACAAACCATGGATGGCAACGCCGCCGTCACAGCCAAACTTAACTAGCAGTGATATGAGCAGTAGCGCTTTCTCAGGGCCACACGGTCCTGCTATGCCACCACCGCATCCTTCTGTGGCACTTGGGTTCAACAAGAGCACGTTCACGTATGAAGAGCTACTGGCTGCAACAGGAGGGTTCTCCCAAGATAATCTCTTAGGACAAGGAGGAAAAGACGCATCAGCAATGGATTGGCCAACCAGGCTCAAAATTGCAATTGGATCAGCCAGGGGCCTTGCTTACTTGCACGAGGATTGTCACCCTAGGATTATTCATCGTGACATTAAAGCTGCGAACATTCTACTCGAAACTAATTTTGATGCGAAGGCCAGACCACTTTGCGCACGTGCATTAGACACAGGTGACTATGATGAACTAGTGGATCCGCGGTTGGAAGATGAATACAATAAAGAAGAGATGTCATGCATGGTTGCTTGTGCTATTGCGAGTGTTAGGCACTCAGCAAGAAGACGACCAAAAATGAGCCAGGTTGTTCGCACATTGGAAGGTGATGTCTCCTTGGATTCCTTGAATGAGGGGCTGAAACCAGGTGGTCAGACGAGTGCAGTATACAGCTCTGATAGTTCTGAGTATGATTCTAGCTCCTACGATGCTGACATGAAGAAGTTCAAAAAGCTAGCACTGGGTACTGAAAACTTTGCTAGCAGCGATCAATATGGACGTACTACAGGTGAATATGGGCATTCTGGCACAAGCAGTGAGTCAACGATGAGCAGGAGATAG 1212 0.4637 MASNQSDSESTEQSPPPPSDSSSSSLPPPPLDVSSSPPPPSDSQSSPPPPSDNQSSSPPPSDDQSSPPPPNMQDKTSLREQIATIGGSVADLQRFCNHTNYTIWPKIFEMASNNDYYSRATSPNMHGQPGDHFVNIPPPPGATNKPWMATPPSQPNLTSSDMSSSAFSGPHGPAMPPPHPSVALGFNKSTFTYEELLAATGGFSQDNLLGQGGKDASAMDWPTRLKIAIGSARGLAYLHEDCHPRIIHRDIKAANILLETNFDAKARPLCARALDTGDYDELVDPRLEDEYNKEEMSCMVACAIASVRHSARRRPKMSQVVRTLEGDVSLDSLNEGLKPGGQTSAVYSSDSSEYDSSSYDADMKKFKKLALGTENFASSDQYGRTTGEYGHSGTSSESTMSRR* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00307 403 MobiDBLite consensus disorder prediction 149 167 - -
Pte2g00307 403 MobiDBLite consensus disorder prediction 149 175 - -
Pte2g00307 403 MobiDBLite consensus disorder prediction 332 358 - -
Pte2g00307 403 MobiDBLite consensus disorder prediction 1 19 - -
Pte2g00307 403 MobiDBLite consensus disorder prediction 20 67 - -
Pte2g00307 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Pte2g00307 403 Gene3D Transferase(Phosphotransferase) domain 1 267 338 - -
Pte2g00307 403 Gene3D Transferase(Phosphotransferase) domain 1 199 266 - -
Pte2g00307 403 MobiDBLite consensus disorder prediction 1 75 - -
Pte2g00307 403 MobiDBLite consensus disorder prediction 377 403 - -
Pte2g00307 403 MobiDBLite consensus disorder prediction 336 356 - -
Pte2g00307 403 SUPERFAMILY Protein kinase-like (PK-like) 214 265 IPR011009 -
Pte2g00307 403 Pfam Protein tyrosine and serine/threonine kinase 216 262 IPR001245 GO:0004672|GO:0006468
Pte2g00307 403 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 214 265 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00307 Pte-Chr2 2379635 2382615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00307 266 399 Trihelix Transcription Factor Family AT1G70460 40.426 5.95e-22 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte2g00307 PK_Tyr_Ser-Thr 3.4e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00307 - - zju:107426856 163.696