Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00302 ATGTCGGATTCCCAGAACGTCTCAGCGGCAGGAGGTTCTCAGTCGGTTTTTTCTTATACAACACCTGTATTCGGTCTAAAGCTTTACATTTTGATAGCAATTCTCATTGGGATCACTCTGGCGGTTCTTGCTCTAATCTATCTCTGTTTTCGCTGGAAGCGAAGGGCTTCCCAGCGTGGAATGAGACCGAGGAGTAGCTCAGCCTTAATCCCGGTGGTCTCTAAGGAAATCGTGGAGATCAAGGGAGTGGACTTGAATCTTAATTCCGAGAAAACTAAGGTCAAAATTGGAAATGCTGATCCGAGGAAGGAGGGACTAGAGATTGGAGGAGGTGAAGCGAAAAGCAGCACCGGAAGTGACGTGTCAGGTGGTAACCGGAGTGACCTGTCGGTGGAGTCTCAAAACATTGGGTGGGGAAGATGGTATAGCTTGAAGGAGCTGCAAGTGGCGACACGTGGCTTCGCTCAAGAGAATGTGATTGGAGAAGGTGGGTATGGGATTGTGTATAGAGGAATTTTGCCCGATGGTTCTGTTGTGGCAGTCAAGAACCTTCTCAACAACAAGGGTCAGGCAGAAAAGGAATTTAAGGTAGAGGTTGAAGCCATTGGAAAAGTGAGGCATAAGAATCTGGTTGGTCTAGTTGGATATTGTGCAGAAGGTCCTCAGAGAATGCTACTGTATGAATACGTTGACAATGGAAATTTGGAGCAGTGGTTGCATGGTGATGTCGGTCCTGTTAGTCCATTAACATGGGAGATCAGAATGAAAATTGCAATTGGTACTGCAAAAGGGTTAGCCTATTTGCACGAAGGATTAGAACCAAAAGTTGTGCACCGAGATGTAAAATCCAGCAATATTCTTCTGGATAGAAAGTGGAATGCGAAGGTGTCTGACTTTGGATTGGCGAAGCTCTTAGGATCTGAGGCAAGCTATGTTACAACACGTGTAATGGGGACATTTGGGTATGTCTCTCCCGAGTACGCAAGCACAGGTATGCTTAATGAGGGGAGTGATGTGTACAGTTTTGGAGTACTACTCATGGAAATAATCACGGGAAGAAGCCCGGTTGATTATTCCAAACCAGCGGGGGAGATGAACCTGGTTGATTGGTTTAAGGGAATGGTAGCTAGTCGTCGTGGTGAAGAGGTCGTAGACCCTTTAATAGATGTTCAGCCAGCACCACGGTCTTTGAAGCGAGCATTGCTGGTTTGTCTCCGTTGTATAGATTTGGATGTTAATAAGCGACCAAAAATGGGGCAAATTGTTCACATGCTTGAGGCAGATGATTTCCCCTTTCGTTCCGAACTTCGTTCGGCCAGAGACAAAGACCCCATTTCTTCGAATGATGTTGTTACCAAGAAAATGTCTGACCGGCCAAATCAGGCCATCGGTCATCCTGATTCAGTTGATAGGTCACGATGGAGATGA 1428 0.4622 MSDSQNVSAAGGSQSVFSYTTPVFGLKLYILIAILIGITLAVLALIYLCFRWKRRASQRGMRPRSSSALIPVVSKEIVEIKGVDLNLNSEKTKVKIGNADPRKEGLEIGGGEAKSSTGSDVSGGNRSDLSVESQNIGWGRWYSLKELQVATRGFAQENVIGEGGYGIVYRGILPDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPQRMLLYEYVDNGNLEQWLHGDVGPVSPLTWEIRMKIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLGSEASYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPVDYSKPAGEMNLVDWFKGMVASRRGEEVVDPLIDVQPAPRSLKRALLVCLRCIDLDVNKRPKMGQIVHMLEADDFPFRSELRSARDKDPISSNDVVTKKMSDRPNQAIGHPDSVDRSRWR* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00302 475 SMART serkin_6 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00302 475 FunFam Putative receptor-like serine/threonine-protein kinase 230 440 - -
Pte2g00302 475 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Pte2g00302 475 SUPERFAMILY Protein kinase-like (PK-like) 127 426 IPR011009 -
Pte2g00302 475 ProSiteProfiles Protein kinase domain profile. 154 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00302 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Pte2g00302 475 Gene3D Phosphorylase Kinase; domain 1 124 229 - -
Pte2g00302 475 Gene3D Transferase(Phosphotransferase) domain 1 230 437 - -
Pte2g00302 475 FunFam Probable serine/threonine-protein kinase At1g01540 134 229 - -
Pte2g00302 475 MobiDBLite consensus disorder prediction 101 128 - -
Pte2g00302 475 PIRSF TyrPK_CSF1-R 6 57 - -
Pte2g00302 475 PIRSF TyrPK_CSF1-R 175 246 - -
Pte2g00302 475 PIRSF TyrPK_CSF1-R 245 471 - -
Pte2g00302 475 MobiDBLite consensus disorder prediction 438 475 - -
Pte2g00302 475 PANTHER OS01G0323000 PROTEIN 16 448 - -
Pte2g00302 475 Pfam Protein kinase domain 155 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00302 475 CDD STKc_IRAK 160 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00302 Pte-Chr2 2349389 2353269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00302 40 428 Trihelix Transcription Factor Family AT1G70460 42.929 8.34e-94 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte2g00302 Pkinase 7.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00302 - - cave:132185293 689.108