Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00298 ATGTTGGATCAGCGAAGCGTTTTAGTTTTTGTGTTTTCGTTAACGTGGCTGTTCCACTTCACATTACAACAGCTTGAGCCACTGAGTTCGTCGGCCGAAAGGGCAGCTCTTCTTCAACTCAGGTCTTCCCTAGGCTTGAGGAGTAGGGACTGGCCAAGGAAGGCTGACCCTTGTTTACTATGGAGGGGTATCATATGTCAGAATGGCTCAGTGGTTGGGATCAGTATCTCTGACTTCAGAAGAACAAGAGTAGGCAGACGAAACCCACAATTTGCTGTTGATGCCTTGGCCAATCTTCCACTCTTGCAGGCCTTCAATGCCTCAAGGTTCTTGCTTGCTGGTCCTATTCCTGAATGGTTTGGACAAAGGCTTCCCTCACTGCGAGTGCTTGATCTTCGTTCTTGCTCTGTAAACGGCACCATTCCTTCAAGTCTTGGCAACTTAACTTATCTAACTGAACTGTATTTCTCCCAGAACAGTCTCACAGGGGCAATTCCTGCTAGCTTGGGTCAGTTGTTAAGCCTGTCAGTTCTTGATCTTTCGCAGAATTCGCTTACTGGATCCATACCTTCGTCATTTGCTTCCCTTGGGAATCTTTCCATTCTTGACCTTTCTGCCAACTACTTATCTGGTTCAGTTCCTCCAGGCATTGGAACGCTACGGAAGTTACAATATTTGAATCTCTCCAACAATGGTTTAACATCTGCCATACCTGCTCAGTTAGGGGATCTCAGTAGCTTGGTTGACCTTGATCTCAGTGCGAACTCTTTGTCTGGTTCTGTGTCACCAGATTTAAGAGGATTGAGAAGTTTGCGCAGGATGTTTCTTGGGAATAACTTGCTTGTTGGTTCTCTACCTCAGGACTTGTTCCCTTCTTCCTCACAGTTGCAGTTAATTGTTCTAAGAAGTAACAATTTCCGTGGTTCGTTGCCTGATGTGCTGTGGTCAATGACTGCATTGAGCTTCCTGGATATCTCTCGCAACAACTTCACTGGTTTGCTTCCCAATTCCAGTCTTAATGCAAATTTCATTGCTGCTGAACTCAATATCTCTCAAAATTCATTCTACGGAGGACTCACACCTGCGCTTGCAAGGTACAGCAAAGTTGATCTATCAAGCAACTATTTTGAGGGTGGGATTCCCTCATATGTGCCTAAGAATGCATATGTTAATATTAATTGTCTCCATAACGTATCTAACCAGAGAAGACCAGAAGAATGCGTTTCATTTTATGCTGAGCAGGGTCTGATTTTTAATAATTCTGGACAAAAGGATTCAACACAACCACCTGAAGCAAGAAAATCTGGCAAGAGTCGCAGTAGGACCATAATATTGGCTGCAGTATTTGGTGGACTTAGTTTGTTAGTATTTTTGGTATTGTTGACAGTACTGCTGCTCCTATGTGCTCGTAAGAGACCGCGGACCACAAATCAAAGAGGGGCTGGTGTTGGTCCTGCTCCCCCTGGAGATAGTCCTTATCCTCCTGGTGTCCCCATAAACCTCTCAAATCTAGGAGAGTCATTTGCATACCGCCAGCTGCTCCAAGCCACTGATGACTTCAGTAATACAAATCTCATTAAAATGGGTCACTCAGGGGATCTCTATAGGGGTTTGTTGGAAAATGGAATCCCTGTAGTTATCAAAAGAGTTGATCTTTTCTCGATTAGAAAAGAATCATATGTACTAGAACTGGAGTTTTTCAGTAAAGTTTCTCATCCAAGGGTGGTTCCCCTATTGGGATATTGCTTAGAGAATGAGAATGAAAACTTTCTGGTTTACAAATACATGCCAAATGGGGACTTGTCAAATTGCTTGCACTGTAAAGGTACGTCTGTCGACGGGACTTTGCAGTCACTGGATTGGATAACAAGGTTAAAAATAGCTTTAGGAGCTGCAGAGAGCCTATCTTATTTGCATCATGAGTCTACTCCACCATTTGTGCACAGAGATGTGCAGGCTAGCAGTATTCTTCTTGATGATAAATATGAAGTACGATTGGGGAGCCTCTCTGAAGTCTGTGTTCGAGAAGAGGATACTCACCAAAGCAGAATAACCAGATTACTACGGTTACCCCAGTCATCTGGACAAGGCCCATCTGGTTCTCCAACGTCCACTTGTGCTTATGATGTTTACTGCTTCGGAAAGGTATTGCTTGAGTTGGTAACTGGAAAGTTGGGAATCAGTGCAACCGGTGATAGTGAGCTGAAGGAATGGTTGGAACAGACACTACCATGCATCAACATATATGACAAGGAGTCCGTGACAAAAATTATCGATCCCACTATGATTGTGGATGAAGATCTACTAGAAGAAGTGTGGGCAATAGCCATTGTAGCAAGGTCCTGCCTTAACCCCAAGCCTTCTAAGAGACCGATAATGAGATATGTTCTCAAGGCCTTGGAAAATCCATTGAAGGTAGCACGGGAAGAACATTCTAGCTCTGCACGACTGAGGACAACCTCTTCTAGAGGGTCTTGGAATGCTGCTTTGTTCGGTAGCTGGCGTCGAAGCTCATCTGATGTCAATGTCATTTCTGCAGTCTCTGGAAACAAACTGGAAAGAACTAGCAGTTTAAAACGTTCGGAAACAATAGATTCACAGGGTAGTTACCAAAATGGTGTAGGTGAAATTTCGTCTTCACACCGACGTCACTCAGGAGATATTCCCAGAACCACTTAA 2679 0.4401 MLDQRSVLVFVFSLTWLFHFTLQQLEPLSSSAERAALLQLRSSLGLRSRDWPRKADPCLLWRGIICQNGSVVGISISDFRRTRVGRRNPQFAVDALANLPLLQAFNASRFLLAGPIPEWFGQRLPSLRVLDLRSCSVNGTIPSSLGNLTYLTELYFSQNSLTGAIPASLGQLLSLSVLDLSQNSLTGSIPSSFASLGNLSILDLSANYLSGSVPPGIGTLRKLQYLNLSNNGLTSAIPAQLGDLSSLVDLDLSANSLSGSVSPDLRGLRSLRRMFLGNNLLVGSLPQDLFPSSSQLQLIVLRSNNFRGSLPDVLWSMTALSFLDISRNNFTGLLPNSSLNANFIAAELNISQNSFYGGLTPALARYSKVDLSSNYFEGGIPSYVPKNAYVNINCLHNVSNQRRPEECVSFYAEQGLIFNNSGQKDSTQPPEARKSGKSRSRTIILAAVFGGLSLLVFLVLLTVLLLLCARKRPRTTNQRGAGVGPAPPGDSPYPPGVPINLSNLGESFAYRQLLQATDDFSNTNLIKMGHSGDLYRGLLENGIPVVIKRVDLFSIRKESYVLELEFFSKVSHPRVVPLLGYCLENENENFLVYKYMPNGDLSNCLHCKGTSVDGTLQSLDWITRLKIALGAAESLSYLHHESTPPFVHRDVQASSILLDDKYEVRLGSLSEVCVREEDTHQSRITRLLRLPQSSGQGPSGSPTSTCAYDVYCFGKVLLELVTGKLGISATGDSELKEWLEQTLPCINIYDKESVTKIIDPTMIVDEDLLEEVWAIAIVARSCLNPKPSKRPIMRYVLKALENPLKVAREEHSSSARLRTTSSRGSWNAALFGSWRRSSSDVNVISAVSGNKLERTSSLKRSETIDSQGSYQNGVGEISSSHRRHSGDIPRTT* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00298 892 Gene3D Ribonuclease Inhibitor 291 407 IPR032675 -
Pte2g00298 892 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 30 189 - -
Pte2g00298 892 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Pte2g00298 892 MobiDBLite consensus disorder prediction 861 879 - -
Pte2g00298 892 SUPERFAMILY Protein kinase-like (PK-like) 495 800 IPR011009 -
Pte2g00298 892 FunFam Predicted protein 491 595 - -
Pte2g00298 892 Pfam Protein tyrosine and serine/threonine kinase 525 796 IPR001245 GO:0004672|GO:0006468
Pte2g00298 892 Gene3D Transferase(Phosphotransferase) domain 1 596 823 - -
Pte2g00298 892 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 96 799 - -
Pte2g00298 892 FunFam Putative LRR receptor-like serine/threonine-protein kinase 596 820 - -
Pte2g00298 892 Pfam Leucine rich repeat N-terminal domain 32 66 IPR013210 -
Pte2g00298 892 PRINTS Leucine-rich repeat signature 244 257 - -
Pte2g00298 892 PRINTS Leucine-rich repeat signature 175 188 - -
Pte2g00298 892 Pfam Leucine rich repeat 221 281 IPR001611 GO:0005515
Pte2g00298 892 Pfam Leucine rich repeat 150 209 IPR001611 GO:0005515
Pte2g00298 892 ProSiteProfiles Protein kinase domain profile. 520 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte2g00298 892 Gene3D Ribonuclease Inhibitor 30 189 IPR032675 -
Pte2g00298 892 Gene3D Ribonuclease Inhibitor 190 290 IPR032675 -
Pte2g00298 892 MobiDBLite consensus disorder prediction 855 892 - -
Pte2g00298 892 SMART LRR_typ_2 196 218 IPR003591 -
Pte2g00298 892 SMART LRR_typ_2 124 148 IPR003591 -
Pte2g00298 892 SMART LRR_typ_2 172 195 IPR003591 -
Pte2g00298 892 SMART LRR_typ_2 317 340 IPR003591 -
Pte2g00298 892 SMART LRR_typ_2 220 244 IPR003591 -
Pte2g00298 892 SMART LRR_typ_2 268 292 IPR003591 -
Pte2g00298 892 Pfam Leucine Rich Repeat 126 148 IPR001611 GO:0005515
Pte2g00298 892 SUPERFAMILY L domain-like 94 407 - -
Pte2g00298 892 Gene3D Phosphorylase Kinase; domain 1 499 595 - -
Pte2g00298 892 MobiDBLite consensus disorder prediction 476 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00298 Pte-Chr2 2320605 2325851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00298 32 692 Miscellaneous Gene Families AT2G16250 58.408 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pte2g00298 PK_Tyr_Ser-Thr 9.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte2g00298 - - qsa:O6P43_001901 1181.39